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Information for unigene UN01245

FASTA Sequence
Unigene ID: UN01245Length: 929 SSR 
GGGTGCATCGTATCATTAAATGTCCTTTTCAAACTTCTCTCATCAAACCATCGCCATAGACACATAACATACACCTCTCTCTCTCT
CTTTCTCTAATTAAAAGAATTAAATAAAAACAACATTGGAGAGAAAGAAAGAAGAGAGGAACAAAATCAAAGGAAGGAAGGAAGGA
GAGGAAACCCAAAAGCTTCCTTTCTTCTTCATCATCATCTTAGATTCCAACTTCCATCCACCGATTGATTATTCATGGCTGAGTTG
ACTCAGGCGGAAGTTGTTTACTCTCGTCGGTCGCTTCAACTGTGGAAGACTCTGGTGAACTGCCTGGCCTTCTTCTACCAGATCTT
CCTCCAGATCCTCCGCGCCGTCGGATACCATCCCCTCCTCTCTTCCTCCGCTTCCGATGGTTTCAAACCCTTACGGAACATCGAAC
TGCTCGAAACGGCGTCGGATTCTCCCACCTCCGTGGAAATCGAGTCCTCCTCAATCCAAGTTCAACTGTTTTTGCCGAGTCTTTGA
ACAAAGTAAGAGCTATGCTGTTTCCTGTACCAAGTAAAGCATCAAAACTAGGTGGCATAGTACCGAACCTAGCAGAAACTGTTGAG
AAGGAGCACAAGAGACTGCTTGCTCGTAAATCAATCATTGAGAAGAGGAAAGAGGATCAAGAGCGTCAACAACTAGAAATGGTAGT
GGTTTTCATACTTGTCCATTAAAGTTGTACCGGTTGATAATAATTGATTGATGTTTTGCTTTTGGAGGAACGTGAGGAGGAACAGA
AACGGCTTAAGCTTCAGAAGCTAACTGAGGAGGCAGAGCAAAAGAGACTTGCGGCAGAGCTTCTGGAGAGAAGGAAGCAAAGGATC
CTTAGAGAGATAGAGGAGAAGGAACTTGAGGAAGCTAAGGCGTTGCTTGAGGACACAGAGAAACGCATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191155 haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana]3004e-025
XP_002878054 NLI interacting factor family protein [Arabidopsis lyrata subsp. lyrata]3004e-025
XP_002874691 hypothetical protein ARALYDRAFT_489971 [Arabidopsis lyrata subsp. lyrata]2843e-023
NP_192881 translation initiation factor eIF-3 subunit 10 [Arabidopsis thaliana]2833e-023
BAE98683 hypothetical protein [Arabidopsis thaliana]2833e-023

Swiss-Prot top hits (Blast detail)Scoree value
Q9LD55 Eukaryotic translation initiation factor 3 subunit A2831e-024
Q40554 Eukaryotic translation initiation factor 3 subunit A2113e-016
Q9XHR2 Eukaryotic translation initiation factor 3 subunit A1773e-012

TrEMBL top hits (Blast detail)Scoree value
Q9LY49 Putative uncharacterized protein3002e-025
Q0WW10 Putative uncharacterized protein At4g114202832e-023
Q0WW15 Putative uncharacterized protein At4g11420 (Fragment)2832e-023
B9I7A2 Predicted protein2545e-020
B9N4M8 Predicted protein2366e-018

Arabidopsis top hits (Blast detail)Scoree value
AT3G55960.1 NLI interacting factor (NIF) family protein3001e-027
AT4G11420.1 EIF3A (EUKARYOTIC TRANSLATION INITIATION FACTOR 3A); translation initiation factor2831e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information