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Information for unigene UN01262
| FASTA Sequence |
| Unigene ID: UN01262 | Length: 617 |
SSR | | GGGAGGACAATAGTATGGGAGTTGAGAACCGTTTAAAGCTTGAAGCGAGGTTGAGAAGTCTGGAAGGGAAAGACGCAGGACGTCTC
TCTGGCTCAGCTAAAGGCAAACCAAAGATTGAAGCTTATGACAAGGATAAGAAGGTGGGATCTGGTGGTCTGATCACTCCTGCTAA
GACTTACAACACTGCTGCTGACTCTGTTATTGGACAAACTTCTAAAGCTGAGGAGAGTGTGAAAGAGAAAAAGGATAAAAAGAAGA
AGAAGAAGGCTGAAGCAGAGGAGGAGGAAGCCAAAACTGAGGAGCCATCTAAGAAGAAGTCAAAGAAGAAGAAGGCTGAAATAGAG
CCTGAGACCGAAGAGCCCAAATCTGAGGAACCTTCAAAGAAGAAGAAGAAGAGGAAGCACGAGGAAGAAGAAACTGAAATGCCTGC
CAAGAAGAAGGAAAAGAAGGATAAGAAGAAAAAGAAGAGTGAGGCTTGAAGAACTTCAAATCCTTTTTTTTTTTTTCGAGTGTCGT
TTATTGTTTTTTGTTTCTTGCCTTAGGTGTTATTTTGAAACTTTTAAGAACTTATCATCCATTTGTAAGGCGTAGTCGTTTTCCCC
AGAAACTTGCATTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_198064 putative nucleolar protein 5-1 [Arabidopsis thaliana] | 596 | 7e-060 |
| XP_002874406 hypothetical protein ARALYDRAFT_489610 [Arabidopsis lyrata subsp. lyrata] | 593 | 2e-059 |
| XP_002884489 hypothetical protein ARALYDRAFT_896572 [Arabidopsis lyrata subsp. lyrata] | 531 | 3e-052 |
| NP_187157 putative nucleolar protein 5-2 [Arabidopsis thaliana] | 528 | 6e-052 |
| XP_002273273 PREDICTED: hypothetical protein [Vitis vinifera] | 408 | 5e-038 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04658 Probable nucleolar protein 5-1 | 596 | 4e-061 |
| Q9MAB3 Probable nucleolar protein 5-2 | 530 | 2e-053 |
| Q9LD90 H/ACA ribonucleoprotein complex subunit 4 | 204 | 1e-015 |
| Q55FI4 Nucleolar protein 58 | 191 | 3e-014 |
| Q6BUE3 Protein PXR1 | 185 | 2e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O65334 SAR DNA-binding protein-1 | 392 | 2e-036 |
| Q9AV96 MAR-binding protein | 382 | 3e-035 |
| B7FLW5 Putative uncharacterized protein | 381 | 4e-035 |
| A2XGN8 Putative uncharacterized protein | 371 | 6e-034 |
| B8APG2 Putative uncharacterized protein | 371 | 6e-034 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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