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Information for unigene UN01279
| FASTA Sequence |
| Unigene ID: UN01279 | Length: 815 |
SSR | | TTTTTTCTCAGGAAAAACAATGGCGGGTTGGCAGAGGAATGTACAGTTAATTCGTCAAGTTGCGAGAAGAGTGACGAACAGTAACG
CTTCGAGAGCCAATTACTCTTCAGCTCGTAGTTTGGAATCCCCTTTCTCAAAAGGTGAATGCTTTTTTGCTCATTTGCTCATCTGA
CTCCATATGTGTGATTTGTTATGGGATAGTGTTGTGTTTTTGTGTTTCAGGTTACTTGCAGGGTCTGTTGGGACCAACCTACACCT
CAACACCACTGCATCATTATCTACAGCAAGTGGGGATTTCGACGTCAAGAAAACTCAAGGCTGGTGAAGAGCCTGTTTCATCACCT
TTGTCATCTCCAGCTCTGTTGGGCACTGGAAAAGAAGAAGAAGAAGAGCACAAGCTTATCCCTAAGCGTAAGAAAGTGCAGGCTGT
ACTCAAGGCCATTAAGCAGAGTCCTAAGAAGGTCAACCTAGTTGCGGCGCTAGTACGTGGTATGTGCGTTGAAGATGCTCTGATGC
AACTGCAAGTCACTGTTAAACGGGCTTCCCATACCGTGTACCGGGTTATCCACGCCGCCCGAGCTAATGCTTCTCATAGCCATGGA
CTAGATCCTGACCGTCTCATCATTGCGGAAGCGTTTGTTGGGAAGGGACTGTTCAAGAAACGGATATCTATCCATGGAAAAGGAAA
ATCCGGGGTGATGATAAGACCCGAGTGTCGTCTAACTGTCGTAGTTAGAGAGACGACTCCAGAGGAAGAAGCTGAGATTGCCAAGC
TCAAGGTTCACAACTGCAAGAAGAAGCTAAGCAAGCGAGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567805 Ribosomal protein L22p/L17e family protein [Arabidopsis thaliana] | 783 | 3e-081 |
| XP_002891694 ribosomal protein L22 family protein [Arabidopsis lyrata subsp. lyrata] | 781 | 5e-081 |
| NP_564605 Ribosomal protein L.2/L17e family protein [Arabidopsis thaliana] | 771 | 7e-080 |
| T04605 hypothetical protein F20O9.30 - Arabidopsis thaliana | 702 | 7e-072 |
| AAG51551 chloroplast 50S ribosomal protein L22, putative; 25606-24374 [Arabidopsis thaliana] | 697 | 3e-071 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q92QG5 50S ribosomal protein L22 | 256 | 2e-021 |
| A6U864 50S ribosomal protein L22 | 256 | 2e-021 |
| Q98N52 50S ribosomal protein L22 | 250 | 8e-021 |
| Q8UE23 50S ribosomal protein L22 | 248 | 1e-020 |
| Q2K9L1 50S ribosomal protein L22 | 248 | 1e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LDU0 At4g28360 | 783 | 2e-081 |
| Q56W16 AT1G52370 protein | 771 | 5e-080 |
| Q9C828 Chloroplast 50S ribosomal protein L22, putative; 25606-24374 | 697 | 2e-071 |
| C0Z2A0 AT4G28360 protein | 629 | 1e-063 |
| B9SDL6 50S ribosomal protein L22, putative | 603 | 1e-060 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G28360.1 ribosomal protein L22 family protein | 783 | 1e-083 |
| AT1G52370.1 ribosomal protein L22 family protein | 771 | 3e-082 |
| AT1G52370.2 ribosomal protein L22 family protein | 771 | 3e-082 |
| AT1G52370.3 ribosomal protein L22 family protein | 771 | 3e-082 |
| ATCG00810.1 encodes a chloroplast ribosomal protein L22, a constituent of the large subunit of the ribosomal complex | 164 | 7e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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