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Information for unigene UN01290

FASTA Sequence
Unigene ID: UN01290Length: 757 SSR 
TCCCAAAGGAGACAAGACACACGTTCGCCTTAGTTGTCCGTTGTAAAAGGTATCTTCGACGGGACTCCGAAGCAAGAAGACACAAC
ACGAAACCGATCTTCTTCCTCTTTCTTCTTGTCCTCGTTGGTGCTTGTTTGATCGATCTTCTCAGATAAGGTTCCTAGGGGTTTAG
GTTTGCTTCTATGACCCGGACACGTTGCAATCGGTGCTCCATGTCTAGGTAAATGAAGGCTTTAACTGATAGGTTTGTTCCTCAAC
CATCATCAAGCAAGAGTGAAACATCTCTAGTTTCGTCAGATTTAGAAGCTAGCGATAATAATAATAATAATAAGTCCAAGTTTACC
TTGCGGTCGGAGTCTTCAACCTCGGGGCATAAGCAAGTTTGCGCTGCTACTTGGACATCGCTTGTAAAGAAAGTCTCTATGGCGAG
TGGTGCGATCAAGAGGTTCCACGATCGTGTTTTGGGACCAAACAGGACTGGTCTTCCGAGCACTGCTAGTGACGTCTGGCTCTTGG
GCGTCTGTTATAAAATATCTGAGGACGAACCCTCAAGGGAAGAAACGGATGATGGAAGCGTAGTGGCTGAACTGAAACAAGATTTT
TCTTCCAGAATACTGATGACATATCGTAAAGGTTTTGAGCCTATTAAAGACACAACCTACACGAGCGATGTAAACTGGGGTTGCAT
GATACGGAGCAGCCAGATGCTGTTTGCTCAGCATTGCTTTTCATAGACTGGGGAGGTCTTGGAGGATCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850412 cysteine protease ATG4a [Arabidopsis thaliana]5072e-049
AAC23418 unknown protein [Arabidopsis thaliana]5072e-049
XP_002881949 autophagy 4a [Arabidopsis lyrata subsp. lyrata]5045e-049
NP_973687 cysteine protease ATG4a [Arabidopsis thaliana]5029e-049
NP_191554 cysteine protease ATG4b [Arabidopsis thaliana]4562e-043

Swiss-Prot top hits (Blast detail)Scoree value
Q8S929 Cysteine protease ATG4a5071e-050
Q9M1Y0 Cysteine protease ATG4b4569e-045
A2Q1V6 Cysteine protease ATG43242e-029
Q7XPW8 Cysteine protease ATG4B2605e-022
Q2XPP4 Cysteine protease ATG4B2588e-022

TrEMBL top hits (Blast detail)Scoree value
Q3EAH0 Putative uncharacterized protein At3g59950.24561e-043
B9STA6 Cysteine protease ATG4B, putative3701e-033
A5BG31 Putative uncharacterized protein3387e-030
B9HG97 Predicted protein3225e-028
B9N8L2 Predicted protein3092e-026

Arabidopsis top hits (Blast detail)Scoree value
AT2G44140.1 autophagy 4a (APG4a)5671e-058
AT2G44140.2 autophagy 4a (APG4a)5024e-051
AT3G59950.2 autophagy 4b (APG4b)4569e-046
AT3G59950.1 autophagy 4b (APG4b)4569e-046
AT3G59950.3 autophagy 4b (APG4b)3913e-038

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
101  50%

Unigene MembersMember information