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Information for unigene UN01300
| FASTA Sequence |
| Unigene ID: UN01300 | Length: 1031 |
SSR | | TTTTTGTTTTTCTTTTTATCTTCAATTCTCCCATTCATACAAGTCACGAGAAAGATTCGGAATTACAATCCTTTGACCGGGGGTAA
TTAAGGAGAGATCAATATTCAATAGTTCCTGGGGGCTCAACTTCACTGACGAGAAACATAAAAAAGAAATCATGTACAGACGTACA
AAGATCTTTTTGCTGTCCATTATGGCGTTTTTTAGTAACAACAGATCATTCAGTCGACCTCACTGCCTCCTTCTATATTACTCTCC
TTAACAAATTTTGACACCAAATATTCTTAAACCCTGAAACCCTTATTTCAACGTGAGTCATTCTCTTCCCTGCGACCCGACCCGGT
ATTCCCACCGACAAGGAAGCTAGCAAATTAAGATGATGACCCGGAAGATAGTTCCCAACTCTAGCTGCTGATGCCTCTCCCATTGC
AGTAGCAGCTGAAGCTTGTTGTTGTTGTTGCTGCTGGTGGCGGACGAATAAAGTGGCTGGTTGCTGCTGCTGTGCAAATAACATCT
CCGGCGGAGCTCCGGCAAAGCTCCATACTTGTCCGAAATCAGGTCTCGCTGGAACCGCCCCAAAACCCCACCACCACTCACTAACG
AAGCCCCCATTGTATGTCCAACTGCTAACCCTCCTCCTAGTCCAGCGCCGACTTCTCCCTCCCCCTCTCTTACTCCTAGTTTCCCG
AGCGTTAAGGAGGAGGAAGTGGATAGAGAAGAGGTGGAGAAACTAGCCGGAGTCGTGCCTGTTCCCGTGGCGGCTATGATAGAAGG
CTCGGCTTGACGGAGGAGCCACTCTATGGTCTGACCGTCTGATTTGTGACCTAACTCTCTAGTCAACTGGAAGACTCGAGCTGCGC
ATATGATCGGCATACGAATACGTCTCCCTCTCCCGTCAACTTTGCTATGTCGATCCTTAGCCGGTGGCTTCTTCACGGCGTTAAGA
GTTCCTTTGTTAACCGCTGACGACGTCTGCTCCACTATAACGCCGTTAGGCACTGATCCGTCGTTGCTCGTCATGGAGTGTTGTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196450 transcription factor TCP21 [Arabidopsis thaliana] | 600 | 7e-060 |
| XP_002871319 hypothetical protein ARALYDRAFT_908782 [Arabidopsis lyrata subsp. lyrata] | 588 | 2e-058 |
| XP_002872048 hypothetical protein ARALYDRAFT_489189 [Arabidopsis lyrata subsp. lyrata] | 406 | 2e-037 |
| ADL36838 TCP domain class transcription factor [Malus x domestica] | 406 | 2e-037 |
| NP_197719 transcription factor TCP7 [Arabidopsis thaliana] | 401 | 8e-037 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FTA2 Transcription factor TCP21 | 600 | 3e-061 |
| Q9FMX2 Transcription factor TCP7 | 401 | 4e-038 |
| Q9C518 Transcription factor TCP8 | 335 | 2e-030 |
| Q93Z00 Transcription factor TCP14 | 331 | 5e-030 |
| Q9C7G4 Transcription factor TCP22 | 329 | 8e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SSB0 Transcription factor, putative | 399 | 1e-036 |
| B8AF71 Putative uncharacterized protein | 391 | 8e-036 |
| B9F4N2 Putative uncharacterized protein | 391 | 8e-036 |
| Q6K7P2 Os02g0828566 protein | 391 | 8e-036 |
| Q2V608 Putative uncharacterized protein | 390 | 1e-035 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G08330.1 TCP family transcription factor, putative | 600 | 3e-062 |
| AT5G23280.1 TCP family transcription factor, putative | 401 | 3e-039 |
| AT1G58100.1 TCP family transcription factor, putative | 335 | 1e-031 |
| AT3G47620.1 AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14); transcription factor | 331 | 4e-031 |
| AT1G72010.1 TCP family transcription factor, putative | 329 | 7e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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