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Information for unigene UN01302

FASTA Sequence
Unigene ID: UN01302Length: 770 SSR 
GTAAATCATATATATATATAGTCATCATAATCAATGAGCATAAGCTTATTTTTCTTTGATGACACAATGTACATTTTTTCTCCAAA
AGAAGATTACAAGAGTGAGCATAGAGGAGAGCTCTAGAGGGGAGGGAGAGGAGAGAGATAGTGAAGATGGGTCAAGAGTCACCGTG
AGAAGAACGAGAAGCCCAAATACCAAACACAAGAAACCAGAAGATGAATAAGATTGCCCAGTAGCGTGCAGGACCATACTTGATTC
TAGTCAGCACCACGAATCTGAAGAAGATGACTATTGTTAGAGCACATAGACCACCAAGCAGGATATGAAGTCCGCTCCTAGCAGTT
TTCTTTCCAACACGAGGAGCAATGAGCCAGACCAAAGTAACAGTGAGTAAACCGGTAGCAAGTAGAAACCCAGTACCTTCCACAGC
CCATTTAGTTGCACGGTTTTCCGTAGGCAAGACCCCAAAGCTCACAACACCTAAAGATTGTTCTGGCGTAGCCTGAGAAGCCGCAA
CAGAGCTACTGTTGTTGTGATTGTTAAGGGAATGTGGACCAAACCATGAAGATATCTCACTAAGTCGCTGCCTTCGAATTGCACCA
GCTTCATCTGCATCTATGGTTGATTCTGTATTCACTTGTAATACAGAGTTTGCATCTCCTCCATCAGCTGTTCTCTCTCTCAAGGC
GACAACCACTTTGTTGAAATCTGCAGTTTTTATATTTTACGCAGCATTCCCACAGATTTCACACACGGTAGATCCATGGTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864866 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]8683e-091
NP_201183 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]8522e-089
XP_002871357 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]7242e-074
XP_002273487 PREDICTED: hypothetical protein [Vitis vinifera]7072e-072
XP_002307061 predicted protein [Populus trichocarpa]6902e-070

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8GUG6 At5g637808522e-089
Q93ZD2 AT5g63780/MBK5_267625e-079
Q9C5A2 At5g087507625e-079
B9H4N8 Predicted protein7195e-074
B9HF63 Predicted protein6747e-069

Arabidopsis top hits (Blast detail)Scoree value
AT5G63780.1 SHA1 (shoot apical meristem arrest 1); protein binding / zinc ion binding8521e-091
AT5G08750.1 zinc finger (C3HC4-type RING finger) family protein7632e-081
AT5G08750.2 zinc finger (C3HC4-type RING finger) family protein7632e-081
AT5G08750.3 zinc finger (C3HC4-type RING finger) family protein7632e-081

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  50%
 
81  25%
 
101  25%

Unigene MembersMember information