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Information for unigene UN01308

FASTA Sequence
Unigene ID: UN01308Length: 931 SSR 
GGAATGATTCAAGGGAAATTAATGTTGGGATTCAAACTTTAAAGAGATAAGAAGTTACATGAATCAGAACGAGATTACATTTCATA
AACGCCATTATTAAGATTATTATTACCCGGTCAATGGTAATCACTGCTAGCCAACAAAACTTTCAAAAATATAAAGAATAAACTTA
ATGACCAAAACAAATTAATTGAAGTGTCTCATCAAAAACGTTAGAACGTTATCACCCCGCCGATAGATAGGCAATGATGCATAGAG
AGAGAGAGAGAGCATTTGCCCCAAGTCCACACGACCATGCCATGGTTTCTCTGTCCGAATCACGGAAAAAAAAGGAAATCATCTCT
CGTGTAAAAATCTTTATTGTCCAGTCTTGGCACGCTTGGTGTTGAAAGGGGACATGCTCGGACTCAGACAAGGGCTCAAGCTCGGA
CTTGGACTCTCTTCCCTTAGCGTACCATTCAGAGCAGCTAACTCCTTCAGCTGTTCCCTCTTGTAGTGGTCCACTGATTCGTCCAT
TGGCTTTAGGAGCGACTCAAGGAAATGAACTGCATGCTCCAATCGAGAGTTGATTATGTCCTCGGGAAGCTCGGCTTCGATCAGTA
AATGTAGTGGCTCACTGGGATGCTCGTAACCTGGCTTACCTTTGAGTTTCTCCTCCTTGAGAGTATCCTTGACGGATCCTCGTCCT
CTAATAAACACCCTACACTGTGTTGCCAGCTCGACTCTTTTTAGAGAGTTCCCACGCGGGCCGAGAATCCGCCCAACGAAATTGAA
GGTTGGAAATTGATCGACAGGCACATCAAGCCTAATCACTCTTTTCACAATGGGTGGAGGAGGAGAATGGAGTCCCCAGCCTACTG
GAGCACGAAATGGGGAAGCTCTCTGGTGATGAAATTCTCTCTGCTTGCATCATGACATCATCAAATCAGCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892515 hypothetical protein ARALYDRAFT_471067 [Arabidopsis lyrata subsp. lyrata]8093e-084
NP_172437 RNA-binding KH domain-containing protein [Arabidopsis thaliana]7951e-082
AAL31922 At1g09660/F21M12_5 [Arabidopsis thaliana]7951e-082
AAB60723 F21M12.5 gene product [Arabidopsis thaliana]7565e-078
XP_002328717 predicted protein [Populus trichocarpa]6525e-066

Swiss-Prot top hits (Blast detail)Scoree value
Q8GWR3 KH domain-containing protein At1g096607956e-084
Q9FKT4 KH domain-containing protein At5g561405018e-050
Q8GYR4 KH domain-containing protein At3g086204954e-049
Q9ZVI3 KH domain-containing protein At2g386104883e-048
Q0WLR1 KH domain-containing protein At4g264754812e-047

TrEMBL top hits (Blast detail)Scoree value
B9N0F3 Predicted protein6524e-066
A9PGS1 Predicted protein6363e-064
B9SKB5 Nucleic acid binding protein, putative6328e-064
C6T8C7 Putative uncharacterized protein6328e-064
B8AYB7 Putative uncharacterized protein5914e-059

Arabidopsis top hits (Blast detail)Scoree value
AT1G09660.1 KH domain-containing quaking protein, putative7956e-085
AT1G09660.2 KH domain-containing quaking protein, putative5511e-056
AT5G56140.1 KH domain-containing protein5017e-051
AT3G08620.1 KH domain-containing protein4972e-050
AT2G38610.1 KH domain-containing protein4882e-049

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
101  50%

Unigene MembersMember information