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Information for unigene UN01332

FASTA Sequence
Unigene ID: UN01332Length: 562  SNP
GGATCACTTCTTTTGCATTGTGCGGAAACTCTTGAGCTTTTGTCTTCATCTTACCAAAGAAACAAACCTCATCGAATCAGATTAGA
ATAATTTCAACCTCGCTAAGAATGAAAATGAAACTCGCTGTTGTAACGTTCGTCATCATCTCCCTACTCCTCTCATCTTCTTTGTT
CATGCTTTCAGAAGCCTCACCATGCGACGGAAAATGCAATGCGAGATGTTCAAAGGCAGGAAGACAAGATCGGTGTCTCAAGTATT
GCAATATATGTTGTGAGAAGTGTAACTACTGTGTTCCCTCCGGCACTTATGGAAACAAAGATGAATGCCCCTGTTACAGGGATATG
AAAAACTCCAAAGGCCATCCCAAATGTCCTTGAACATGTTTTGAAGATAATCTTCATATACATCATATCTATTATACACAAAAATA
TTACAATGGTGGTTGGCGTATGAAATAATGAGTTTGAATATGTTTGTATGGAAATGTGAAAGATATTGACTATAAACGAAATAATG
TACTTTTAATTTCAACTACTAAAAGTAAAGCTTTTATTTATATGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864654 gibberellin-regulated family protein [Arabidopsis lyrata subsp. lyrata]4263e-040
ACJ68116 hypothetical protein [Brassica napus]4102e-038
NP_568914 gibberellin-regulated protein [Arabidopsis thaliana]4075e-038
BAB08352 unnamed protein product [Arabidopsis thaliana]4003e-037
NP_181486 gibberellin-regulated protein [Arabidopsis thaliana]3564e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q948Z4 Snakin-13088e-028
P27057 Protein GAST12003e-015
P46687 Gibberellin-regulated protein 31861e-013
P47926 Protein RSI-11851e-013
P46688 Gibberellin-regulated protein 21842e-013

TrEMBL top hits (Blast detail)Scoree value
D2CVS4 Putative uncharacterized protein4101e-038
Q8LFM2 Contains similarity to gibberellin-stimulated transcript 1 like protein4073e-038
Q9FJF0 Similarity to gibberellin-stimulated transcript 1 like protein4002e-037
O80641 Similar to gibberellin-regulated proteins3563e-032
B9MVY8 Predicted protein3232e-028

Arabidopsis top hits (Blast detail)Scoree value
AT5G59845.1 gibberellin-regulated family protein4082e-040
AT2G39540.1 gibberellin-regulated family protein3572e-034
AT1G10588.2 Encodes a Gibberellin-regulated GASA/GAST/Snakin family protein3212e-030
AT1G10588.1 Encodes a Gibberellin-regulated GASA/GAST/Snakin family protein3203e-030
AT2G14900.1 gibberellin-regulated family protein2479e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
68  38%
 
89  43%
 
114  19%

Unigene MembersMember information