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Information for unigene UN01336

FASTA Sequence
Unigene ID: UN01336Length: 1592  SNP
GCTCTCAAGACTTAATTATTAATATTCAACTGTTTTAAACAAATTATATGTATGAACTACCTTAGTAGAACCGTATAATACATTTC
ATAAGTTTCATGTTTTATGCCTCCAAGAATAGATGATAAGAATATTTTCCACATCAACCAGTTTTACCCATACGAAGACTGTCGGT
GGTAACCGGTGTTGACAGTTGACTTTGTTGTCCCACCTGAGACCCAAATCTCATCATGTCCATTGGTTGTTGCACTGTTTGCGTCT
GAGTCGTTGCCGGCATCGGTGGAAACCCACCCATGTACCTTGCAAGCTGCTCCGACAACATTTGGTTCTGTGCTTGCATCTGAAAC
TGTACGGCCGGGTTTTGACATACTAAACCGGGATGGTTCTGTGCAGCGGGTCGGTTCATAACCGGAAACTGAGGCATTTGCATTTG
ACTCTGCATAGCCATCTGATTAATGTACTGAGATGACTGTACACCAGGAAACATCATCGGAGTCGCTGCTGCTGCAGCCGCTGCCG
CCATTCCACTTCCCATCCACATCACTTGGAGTTGCATTTGAAGTGTTTTCAAGTAATCAATGGCTTCGTCCAAAATCGACGCTTTA
TCCGTTTTACTGCAATGAGGTATAAGTTCTTGAAGAGCTTTCATTCTCTCATTGATCCGATCTCTCCTCCTCCTTTCTGAGAGATT
ATGAACTTCAGCCGCACGGCTTCTTCGGGTAGATCCTGACCGTTGGCTAGATTTGTTACCCATGGCTTGATCATCAGTTGACATCA
GACGTACATCAGACTGAGACATGGATTCTTGATCAGTGTCCATTGCATGCTTTCTTTTACGGCTAATGGTTACGCTTCTCCCACTC
TCGGTTTCTTTGCTGCAACCGGACGAGCCACCAGACGAAGTGTCAAGTCTTTCTTCAACGTTCTTGCTTCTAGCATTCATAGAAAC
CGGAGGATGAGTCACCTGATGATCATTTGTAGAGTGGTTGCTCCCACAGTGGCTCGGTCCAACACTTACAACCGGTGGCCTAAACT
TAGGAGGAGCCATGGCTTTAGCCTCGGGTTTGGCTGTCTCTTTGATAGTCAGTGGCTTCTTGGGATGATTTGGACCATCAAGGTGA
TCGATTGAAGAGAAGAAATGGGAGGAGAACTCCGATTCAAAGGGGTCAACTACGTCTTCAGGAGGGTATTGGATCCAGGAGACGGT
TTCTTGGTCTCCCTGAACATTGTCATTAGGTCTTCGTATTGTTTCTTGATTGTCAAGTAAAGCATTGTTGGGTTTTCGTAGTGTTT
GGTCATTTTTGTGGGTTTGGACTTGGACTGATGGTTCTCTACGAACTTGGCTTTGTAAAACCACTTGACCATCTCTCCATAGTAGC
TCCACTAGTTCATCTTCTGGTCTGACTGATCTTTTGTTAGAGGACATGTGAAAATTATCTTCAAAATTCCAATCAGAAAACAGTTG
TTCCATGTCAGATCTCAGATTTAGAAGCCCCTGAGTGATGAGAAGATCTTCTTAGCTATATCTGCTTTGTGCTTCACACGTAACAA
AATAGAGCTAAGAGAAGTCTCTCTCTCCTAGCTCTGTAGGTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34514 unnamed protein product [Thellungiella halophila]18618e-206
NP_191465 transcription factor PIF5 [Arabidopsis thaliana]18196e-201
NP_851021 transcription factor PIF5 [Arabidopsis thaliana]18115e-200
AAM10954 putative bHLH transcription factor [Arabidopsis thaliana]17982e-198
XP_002878258 phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]17749e-196

Swiss-Prot top hits (Blast detail)Scoree value
Q84LH8 Transcription factor PIF518192e-202
Q8W2F3 Transcription factor PIF411087e-120
O80536 Transcription factor PIF33031e-026
Q8GZM7 Transcription factor PIF12888e-025
Q8GT73 Transcription factor bHLH1192833e-024

TrEMBL top hits (Blast detail)Scoree value
B9DH29 AT3G59060 protein18194e-201
B9DFT8 AT2G43010 protein6601e-066
B9DHW1 AT2G43010 protein (Fragment)6601e-066
D5JZM7 Phytochrome interacting factor 46601e-066
B9H863 Predicted protein4951e-047

Arabidopsis top hits (Blast detail)Scoree value
AT3G59060.2 PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6); DNA binding / transcription factor18202e-203
AT3G59060.3 PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6); DNA binding / transcription factor18202e-203
AT3G59060.4 PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6); DNA binding / transcription factor18202e-203
AT3G59060.1 PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6); DNA binding / transcription factor18174e-203
AT2G43010.1 PIF4 (phytochrome interacting factor 4); DNA binding / protein binding / transcription factor6605e-069

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  14%
 
75  36%
 
121  7%
 
192  14%
 
214  29%

Unigene MembersMember information