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Information for unigene UN01339
| FASTA Sequence |
| Unigene ID: UN01339 | Length: 1113 |
SSR | | GCGAGGAACTAGAGGCTTTTTCTTATATATGAAATACTATAGAGTTCGCCTAACATATATAGCAGTTTCTATCTTAAATAGAGATG
ACTGAAGCATGCATCGATTCTGGATCACCCTTGCAAGTAAGCTCCACAAAAGTACCCGCACCTTCTCCTTTCGCAAGTCTTCCAGG
GTTTACACACACACACTTGGCCGCATCTTCCCCTTCCCCAATGGACAAAACCTTCACGAAGTACGTTATGTCGGATGGAAGTAGGA
GAATGTCCGGGATTGATGAAATCTGGAGCGCCTGAGGAGCTAGTGAGGAATCATAAGGGAAACTCTCTGGCGGTGGATACAGAGGA
TAGAAGCTTCGCTGACGAAGGAGATGGCTAGCGAGTCTGGCTAAGCGATCAGTGGGGACTCCACTTGGGTTTCTCGACATCTCCTC
CACACTCAGCTGCTTTATTACATCCACCGTGCAGCAGCCTACCTTCACCTGGTTTGCCTCAAAGGTCCCCGGGTTTGACAGACTGG
TTATCTGATGTTCGAGATCAGGTATGTGAATGTCGAAAGGAGGCTGTGGGAATATGAAATCATGGTTAGCATCACGGATGGATGGA
ACCAGAACCACTCGTACTTCTGAACCCATGAATTCAACATATTCTTGCACCCTCCTGATGACTTCCACTTCAAATATCTCACTGAA
GGTGGCATCAACAGTTCCTTTTTTAATTTCTGGATGATCAGAATCAACAAACGGTCCAAGCAGCACAAGTAACTGTGGAGGCTTTC
TTTTTGCATGGGCTAGTAGCTCACTCAGTGGCTCAAACAGCAAGTTGTCTAATGTGGTGAATGGTCCGGATGCAATTATAAATGAA
ACCTCTGATTTTTCATGGGATTCGTCAGCAGGAGTTAAGACCTCCTTATCCAAGTTTTGCTTCTTAGCAGGAGGTAGATCCAAGTC
AGCAGTGCGTGATAAAGGAACTGTATCCAGCAGCTTGGATGCAGTGAGATAGTGTCCACTAGGATTTTGTCCTTCAACGCCAACTA
TCTGGCCTGGAAAAATAGAGAACTGATTTAGTCTGTTTAAGTCCAGTGGAACACGCTGTCCTGAAGTTCTCTCGGCACTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176930 DNA polymerase alpha 2 [Arabidopsis thaliana] | 1582 | 1e-173 |
| BAC43176 putative DNA polymerase alpha subunit [Arabidopsis thaliana] | 1579 | 2e-173 |
| XP_002888612 DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp. lyrata] | 1579 | 2e-173 |
| XP_002514998 alpha DNA polymerase, putative [Ricinus communis] | 1232 | 4e-133 |
| XP_002265789 PREDICTED: hypothetical protein [Vitis vinifera] | 1228 | 1e-132 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q58D13 DNA polymerase alpha subunit B | 368 | 3e-034 |
| Q9VB62 DNA polymerase alpha subunit B | 368 | 3e-034 |
| Q14181 DNA polymerase alpha subunit B | 367 | 3e-034 |
| P33611 DNA polymerase alpha subunit B | 357 | 5e-033 |
| O89043 DNA polymerase alpha subunit B | 351 | 2e-032 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GWX4 At1g67630 | 1579 | 2e-173 |
| B9RMM9 Alpha DNA polymerase, putative | 1232 | 3e-133 |
| C5Z7Y0 Putative uncharacterized protein Sb10g009040 | 1052 | 2e-112 |
| B4F916 Putative uncharacterized protein | 1045 | 1e-111 |
| Q9CAF8 Putative DNA polymerase alpha subunit | 1043 | 2e-111 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G67630.1 POLA2 (DNA POLYMERASE ALPHA 2); DNA binding / DNA-directed DNA polymerase | 1583 | 3e-176 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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