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Information for unigene UN01350
| FASTA Sequence |
| Unigene ID: UN01350 | Length: 1309 |
| SNP | CCTTCCTAATACTTTTTATTCAACGGCGACGACTCTGGTCTCCCAAATCGAAACGATGACGTACAGGACCTTGAAACTGTGACCAA
CACTGCCTAGTGTATTGTAAGTCTGTAACAGGTCTCATAAAGCAAACAAAGAAAACACTTAAAAGAGAAAAGATACACCACTGAGT
AAAGATGAAGATCACTAGCATCACAACTTATTCAGAGATCTTCTTCTTCTCAACCTTGACAAGGATCGATATCAACCATCCAACCT
TTTGTGTCTTCAACAAGACCTGTCTGAATACTCGTCAACATCGAGTGAAGCTTCTTAGACAATGCCTCTTCTCCTGTTCTGTATTT
TACCTTTTTGTCATGGAAGGTCACGGTTTCAACAGCTTTAACGACCACTGCAGTTCCCGTGCAGAACACTTCTTCCGCCTCTAATA
ACTCATCCACAGAAACATCACGTTCTTGAACCTGGTAGCCGATATCAAGAGCTAGCTCGCTTATGCTTTTCCTGGTGATTCCTGGT
AAAATGGTTCCGGAAGTTGGTGGAGTAGAAACAATATTCCCCTTGACAATGAAGATGTTACATGCAGACGCCTCTTCGATGTTCCT
GCCAGTTGCAGCATCTAGGAACAAGACATCAGAGAAACCTGATGACTTTGCTTCTACCAGCGATTTCACAATTGGGGAATAGTTTG
TGCAACTCTTGACACCACCAGTCCCACCAGAATGTGCTCGGTGATGCTTATGATCAACTTTAAGATTCAGACCTGAGCTTCCCTTG
TGGTAATCTCCACGGGAGATGCGTAGATGAGGAACGTGTACTCAGGTGCTGGAGCTACTCCGAGGCTAGCGCCACTCCCTATTAGC
AGAGGCCTTATATACAAAGCTCCTTTACCCGGGGGAGGAACCCATCTCTTGTTGGCAGTCACAGTTTGCTTAACTGCTTCGACGAA
GAATTCCACAGAAGGTGATGCCAAACAAAGCCTCTCTGCACCATCTTGCATACGAAGAGCGTTTTCGTGAGGCCGGAAAATCAGAA
TCCGGTCGTCCTCTGTCCTGTAAGCTTTCAGACCTTCAAATAGTCCCTGGCCATAGTTGAGAATAGGACAACAAGGGCTGATTGAA
ATGTCACCATAAGGAACAATCTTCCCTTCTGCGAAACTCTCTCCTTGTCTGCACTTGGCCACATACATGCAATCTGTTGGGGTCAG
AGCGAATCGAAGCTCTTCCCATTTCACATTCGCATATTTTTCATCGCCTTCACTGCTTAAACACATGACATACATATTAAGAGGTT
CAGAACAATAAAGGATTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_175431 branched-chain-amino-acid aminotransferase 6 [Arabidopsis thaliana] | 891 | 2e-093 |
| AAM66943 branched-chain amino acid aminotransferase, putative [Arabidopsis thaliana] | 891 | 2e-093 |
| BAE99071 branched-chain amino acid aminotransferase like protein [Arabidopsis thaliana] | 887 | 5e-093 |
| XP_002894233 branched-chain amino acid aminotransferase 6 [Arabidopsis lyrata subsp. lyrata] | 868 | 8e-091 |
| XP_002894231 aminotransferase class IV family protein [Arabidopsis lyrata subsp. lyrata] | 832 | 1e-086 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LPM9 Branched-chain-amino-acid aminotransferase 6 | 891 | 8e-095 |
| Q9LPM8 Putative branched-chain-amino-acid aminotransferase 7 | 824 | 4e-087 |
| Q9LE06 Probable branched-chain-amino-acid aminotransferase 4 | 582 | 5e-059 |
| Q9M439 Branched-chain-amino-acid aminotransferase 2, chloroplastic | 569 | 2e-057 |
| Q9FYA6 Branched-chain-amino-acid aminotransferase 5, chloroplastic | 551 | 2e-055 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WUX7 Branched-chain-amino-acid aminotransferase | 887 | 4e-093 |
| C5H9M6 Branched-chain aminotransferase 4 | 598 | 1e-059 |
| B9GNK4 Predicted protein | 591 | 7e-059 |
| C5H9M5 Branched-chain aminotransferase 4 | 587 | 2e-058 |
| Q0WW34 Putative branched-chain amino acid aminotransferase | 582 | 8e-058 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G50110.1 branched-chain amino acid aminotransferase 6 / branched-chain amino acid transaminase 6 (BCAT6) | 892 | 5e-096 |
| AT1G50090.1 aminotransferase class IV family protein | 824 | 4e-088 |
| AT3G19710.1 BCAT4 (BRANCHED-CHAIN AMINOTRANSFERASE4); catalytic/ methionine-oxo-acid transaminase | 582 | 4e-060 |
| AT1G10070.1 ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2); branched-chain-amino-acid transaminase/ catalytic | 569 | 1e-058 |
| AT1G10070.2 ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2); branched-chain-amino-acid transaminase/ catalytic | 569 | 1e-058 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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