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Information for unigene UN01366
FASTA Sequence |
Unigene ID: UN01366 | Length: 1142 |
SSR | | TTTTTTGGGGTGTGCTCGTATACTTGATACGATCAGTTTTGATTCAGGGCTTATGACGATGGTTGTTCCTGTGTTTGATGGGACTC
ATCATGAGTGTTGGAGCGTAAAAATGAAAACCTTTTTGAAGGCTATCGATCTATGGGATGTCGTGGAGACGGGAATATTCCAACAA
GAGGAAATTTCATCGGCATATCAAAAATTTGAAGAAGGTTATGCATCATCACCATCATCATCATCATCATCATTCACTGCTTCAGC
CTCGTGGAAACAATGGATGGAAATGAAGGACACAACAGCGCTTCATATGATCCAAAACGCATTAACCTTTGAGATTTTTCCGTGGA
TAGCTTCCGCTACGTCATCAAAGGAGGCATGGGAGATTTTGTCAGCGAAATCACTAGGCGGTCCTATGTATCAAGCTAGAAAACTT
TTTAATCTCAAGAAAGAGTATGATGATATGAAAATGAGCGACACGGAAACAGTTCATGAATTCACTGGGAAGGTAATGGAACTTGT
GTTTCGTATGAGGTCTTGTGGATGGGAGGTCGAAGATAAAGAAGTGGTGAACAAGATTCTTTCCTCTTTGCCTTTAAGATTTAACG
AAGCGTTGGTCGAAGAAGCGGAAACGCTTTCTATTTGCGATCTTATTGATTTCTTGCTGGTGCATGAATACAATTCGGCTCAAGAA
TCTGTAGAAGAATCGGTCACTGGTGTGGAAAAAAGTCACGGTGACGAACGTGAAACGTCAAACTCTTCGGAAAATGCCACTCAAAG
CAAACGGAGCATCAGAAAGGTTAAAGTCTCCCAAGTGCCATTGACGGAAAGACTGAGAAAAGAGGAGTGGGAAGTAAAAGTTTTTC
TTGCGATTTCGTTTGTCGTTTTGATCTATCTTTTGTTATGACCGAAGGTTTTCAATTAAATGCATGATGAGAAAGAGAAAAATAAT
ACAAGCTTTCAGTCAAGTTCTTAGTAAGTTTGGGTTGTATTTGCATCATGTTAGAGAAGAGTTGAGGGTTTGTCTCCCTGAGAGAC
ATTCCGGTGAGTAGTACTGTGATGTGATTGCTCGCTGTCCAGAGTAAGTAGAGCGTTTGTTTTGCCACTTGATGGGAAGAAAGCAT
TCGTTTGTTTTGGTGTTTGACTTT
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GenBank top hits (Blast detail) | Score | e value |
BAB09901 unnamed protein product [Arabidopsis thaliana] | 477 | 1e-045 |
AAL75752 Putative copia-type polyprotein [Oryza sativa Japonica Group] | 247 | 7e-019 |
AAT47077 putative polyprotein [Oryza sativa Japonica Group] | 247 | 7e-019 |
NP_001064026 Os10g0106900 [Oryza sativa Japonica Group] | 247 | 7e-019 |
CAH66391 OSIGBa0134J07.9 [Oryza sativa Indica Group] | 246 | 9e-019 |
Swiss-Prot top hits | Score | e value |
No hits found | | |
TrEMBL top hits (Blast detail) | Score | e value |
Q9FJT0 Genomic DNA, chromosome 5, P1 clone:MIK19 | 477 | 1e-045 |
Q0IZC5 Os10g0106900 protein | 247 | 5e-019 |
Q6I5H9 Putative polyprotein | 247 | 5e-019 |
Q9FWI2 Putative copia-type polyprotein | 247 | 5e-019 |
Q01LI0 OSIGBa0134J07.9 protein | 246 | 6e-019 |
Arabidopsis top hits | Score | e value |
No hits found | | |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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