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Information for unigene UN01370

FASTA Sequence
Unigene ID: UN01370Length: 1081 SSR 
GGAACGCAATCCCCACACGTGAAGTGTCATAGAAAAAGCAACGACACTCGAAGTGCGTTTTCTCTTGAATCTGCGTTTTACACAGC
CTCTCTCTCTCTCTCTCTCTTTCCAGGCTACGAAGATCAAACTCCATGGCGATAAGATCAGTCAAAGTTAGCAATCTCTCATCAGG
AGCAACAGAGCATGGTATCAAAGAGTTCTTCTCTTTTTCCGGTGAGGTTGAAAGCATTGACATCCAAGGCAATGAGCATAGTGCTT
ATGTCACATTCAAAGATCCTCAAGGAGCAGAGACCGCTGTGCTCTTATCAGGTGCAAGTATTGCCGATCAGTCAGTCATCATTGAG
ATGGCTCCTAACTACACTCCACCTGCTGCCCCTCATGCTGAAACACAGAGCGGGGGAGGAGGCGGAGGCGTCGCAGAATCAGTTGT
TCAGAAGGCAGAAGATGTTGTGAGCAGCATGTTAGCAAAGGGTTTCATCCTCGGTAAAGACGCGGTCGGCAAAGCAAAAGCGTTCG
ATGAGAAACTCGGTTTCACTTCAACCGCAACAGCAGGAGTTGCTTCTATAGACCAAAAGATCGGTCTAACCCAAAAAATCACAGCT
GGTACAAGCTTGGTGACCGAGAAGATCAAAGGGGTGGACCAAAGCTTCCAGGTCACAGAGAGGACCAAGTCTGCCTTTGCGACTGC
GGAACAGACTGTGAGCAGCGCGGGAACGGCCGTGATGAAAAACCGTTTTGTATTAACAGGTGTGAGCTGGGCGGCAGGAGCGTTCA
ACAGAGTTGCTAAAGCAGCTGGAGAGGTTAGTCAGAAAACAAAAGAAAAGGTTGAAGCTGAGCAACCACCACAACCGTCGCAGACA
GAGCATCAACCACCAGAAGGGTATTCTCCGATTCATTCGTCTGAATCGAAGCACTAAATCTCATTACAGTGAAGAAGGTTGCGTTT
TCTTTTTCTTGTTGGTTTCTTTGATATGAAAAATGTGGGATTTTTTTTGTCTTTTGGATTGTAACATAAAAGCTATGTTTGGATCT
TCTACATTCGTAGTTCGTGTTTCTTATAAGATATTCATATAGTATTCAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197186 binding partner of acd11 1 [Arabidopsis thaliana]10919e-117
XP_002871738 RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata]10891e-116
AAM64946 unknown [Arabidopsis thaliana]10882e-116
AAL25562 AT5g16840/F5E19_180 [Arabidopsis thaliana]10863e-116
NP_001078595 binding partner of acd11 1 [Arabidopsis thaliana]10829e-116

Swiss-Prot top hits (Blast detail)Scoree value
P87216 Protein vip11693e-011

TrEMBL top hits (Blast detail)Scoree value
Q9LFD5 Putative uncharacterized protein F5E19_18010916e-117
Q8LB67 Putative uncharacterized protein10881e-116
Q93Z43 AT5g16840/F5E19_18010862e-116
A8MQX8 Uncharacterized protein At5g16840.310826e-116
A8MSB5 Uncharacterized protein At5g16840.210826e-116

Arabidopsis top hits (Blast detail)Scoree value
AT5G16840.3 BPA1 (BINDINGPARTNEROFACD11 1); nucleic acid binding / nucleotide binding / oxidoreductase11031e-120
AT5G16840.1 BPA1 (BINDINGPARTNEROFACD11 1); nucleic acid binding / nucleotide binding / oxidoreductase10941e-119
AT5G16840.2 BPA1 (BINDINGPARTNEROFACD11 1); nucleic acid binding / nucleotide binding / oxidoreductase10824e-118
AT4G17720.1 RNA recognition motif (RRM)-containing protein6901e-072
AT5G46870.1 RNA recognition motif (RRM)-containing protein6513e-068

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
1110  48%
 
124  19%
 
84  19%
 
182  10%
 
201  5%

Unigene MembersMember information