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Information for unigene UN01380

FASTA Sequence
Unigene ID: UN01380Length: 1285 SSR 
TGATCTATCTCTCTCTCTCTCTTTTTTTTTTGAACAACTGATCTATCTCTCTCTATATTCCTTGAGTTTGTGAGGAAACATGGATT
CGGACGCGACCGTGCCACTGAGCGAGCGACCGGAGTGGTCGGACGTCGTGCCGTTGAGTCAGGACGATGGTCCGAACCCGGTGGTT
CCGATCGCGTACAAGGAAGACTTCCGGGAGACTATGGATTACTTCCGCGCGATTTACCGCTCCGACGAGCGGTCTCCTCGCGCGCT
GCGACTAACGGAAGAAGCTCTCCGCCTAAACTCCGGCAACTACACCGTAAACTGAGATCCTTCTTCTTCTTCTTCTTATTTGACTT
ACTGTTCTGAAAGAGTTGTGGATTTGATTAGAGCATATATATATCTGTTCTTTTCTTTTCTTTTTTTTGAAGGTGTGGTACTTCAG
GCGCTTAGTACTGGAGGAGCTTGATCACGACTTGTATGAAGAGCTCAAGTTCATCGAAACCATTGCTGAGGATAACTCTAAGAACT
ACCAGTTGTGGCATCATCGGAGATGGGTTGCAGAGAAACTGGGTCCTGATGTTGCAGGAATGGAACTTGACTTTACTCGGAAGGTT
CTATCAGTTGATGCCAAACATTATCATGCTTGGTCACATAGGCAGTGGGCGCTACAAGCATTAGGAGGGTGGGAAAATGAGCTTGA
TTACTGTCACGACCTCCTTGAAGCTGACGTCTTTAACAATTCTGCGTGGAATCAGAGGCATTACGTTATTACTAGATCACCTTCGT
TGGGAGGCCTAAAAGCCATGAGAGAATCTGAAGTAAGCTACACAGTCAAAGCCATTTTAGCAAATCCCGGGGACGAGAGCTCTTGG
AGATACCTGAAAGCTCTTTACAAAGACGACACAGAGTCCTGGATTAGTGATCCAAGTGTTTCCTCAGTATGTTTGAAAGTTCTCTC
GCGCACGGACTGCTTCCACGGATTCGCTCTGAGCACCCTTTTGGATCTTCTATGCGATGGGTTGAGACCAACCAACGAGCATAGAG
ACTCGGTGAAAGCTCTAGCTAATGAAGAATCAGAGACTAACTTGGCCAGTTTGGTGTGTACCATTCTAGGTCGTGTTGATCATATG
AGAGCTAACTATTGGGCATGGAGGAAGAGCAAGATTACAGTGGCAATATAAACCTACCCTGAATCACACTTGAAAAAAAGTTGTTT
ATTTTTACGTTTTAATCTGCTGCTTTTTCATGAAATCGCATGAACATGTTACCATTCGTCAAAACAAATCTTTTTTTCCCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAB91608 farnesyltransferase subunit A (FTA) [Arabidopsis thaliana]12057e-130
NP_567084 farnesyltransferase A [Arabidopsis thaliana]12057e-130
AAC61853 protein farnesyltransferase subunit A [Arabidopsis thaliana]12057e-130
BAJ34577 unnamed protein product [Thellungiella halophila]11941e-128
XP_002876500 protein farnesyltransferase subunit A [Arabidopsis lyrata subsp. lyrata]11904e-128

Swiss-Prot top hits (Blast detail)Scoree value
Q9LX33 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha12053e-131
O24304 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha8253e-087
P93227 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha7716e-081
Q61239 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha4015e-038
P29702 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha3971e-037

TrEMBL top hits (Blast detail)Scoree value
B3LF91 At3g5938012055e-130
Q0WS67 Protein farnesyltransferase subunit A (Fragment)11151e-119
B9T797 Protein farnesyltransferase alpha subunit, putative9091e-095
B9HH66 Predicted protein8982e-094
A5AXJ9 Putative uncharacterized protein8911e-093

Arabidopsis top hits (Blast detail)Scoree value
AT3G59380.1 FTA (FARNESYLTRANSFERASE A); farnesyltranstransferase/ protein heterodimerization/ protein prenyltransferase12052e-132
AT4G24490.1 protein prenyltransferase1981e-015
AT4G24490.2 protein prenyltransferase1981e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  20%
 
191  20%
 
112  40%
 
121  20%

Unigene MembersMember information