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Information for unigene UN01411

FASTA Sequence
Unigene ID: UN01411Length: 817 SSR 
GGAGATCAACCATTAATCTCACCACAGTTTCCTTGTTTCTAGAGAGAGAGAGAGAAGAAGATATCTCGTTTGTGAAAATGGTTGAT
GTGGCCGACAAATTAGGTTACTTCCAAGCGATCACAGGCCTCGAAGACCCCGATCTGTGCACGGAGATCCTCCAAGCCCATAACTG
GGACCTCTAACTCGCCATCTCCTCCTTCACTTCATCCGATCAAGCAAGGGAGAGACAGAGGCAAGAAGAGGAAGAGCGTTTAGAGA
GGGAAGCTGCTGAGGCAGAGAGGAAACGCAAAGAAGAAGAAGAGGCTCGGGAGAGAGAAGCTGCTAGAGTGAGAATGAGACAAGAG
AAAGCACTTGCTCTTGGAGACGAACCCGAGAAAGGACCTGATGTTACACAAGTTTTGGTGAGGTTCCCGAATGGAGAAAGAAAAGG
GAGGAGGTTTGAAAGCAATACCAAGATACAGACATTGTACGACTACGTTGATTCACTTGGGGTGCTGGAAACAGAAGAGTATAGCT
TAATAACAAACTTTCCAAGAACAGTGTATGGAAGAGACAAAGAGTCAATGTCACTGAAAGATGCAGGTTTGCATCCTCAGGCAAGT
CTCTTCATTGAGATCAACTAAGTTTCAGATTCTTCTGTTTCCTTCTCCTTTAGCCACTTTTTCAGTTCTTTTTTTACATCTCTTTT
AAATAATTAGTAGTGTTGCTTCAGTGATCCGATGAACAAGATAACATATATACACTCGTATATTCAGAAGTTGTGTCAGATAATAT
TTGATATATTTATTTCTTAAAATGGTTTCGCATTGTATTATTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874649 hypothetical protein ARALYDRAFT_489923 [Arabidopsis lyrata subsp. lyrata]6094e-061
BAD44445 predicted protein of unknown function [Arabidopsis thaliana]5333e-052
AAC35520 contains similarity to tropomyosin (Pfam: Tropomyosin.hmm, score: 14.57) and ATP synthase (Pfam: ATP-synt_B.hmm, score: 10.89) [Arabidopsis thaliana]5333e-052
NP_192817 UBX domain-containing protein [Arabidopsis thaliana]5333e-052
XP_002303682 predicted protein [Populus trichocarpa]4454e-042

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O82483 T12H20.9 protein5332e-052
Q67XY6 Putative uncharacterized protein At4g10790 (Fragment)5332e-052
Q9M0N1 Putative uncharacterized protein AT4g107905332e-052
B9GXV5 Predicted protein4453e-042
Q5DJU1 Fas-associated factor 1-like protein4391e-041

Arabidopsis top hits (Blast detail)Scoree value
AT4G10790.1 UBX domain-containing protein5349e-055
AT4G23040.1 UBX domain-containing protein2032e-016
AT4G11740.1 SAY11988e-016
AT4G00752.1 UBX domain-containing protein1422e-009
AT2G18540.1 cupin family protein1136e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  100%

Unigene MembersMember information