 |
Information for unigene UN01422
| FASTA Sequence |
| Unigene ID: UN01422 | Length: 729 |
SSR | | TTTTCCATGGAAGCTAGAAGACTCGCGATCCTATGTTCCCATCTCAACCCAGCCGGTCCTTACCCACCCAGAGACTCGATTCTCAG
GGTATCCGATTGTAGCTCCGGCGAAGACAAGGTCGAATCATCCAATCTACAAAACGACTGCGTTTTCTGCAAGATTGTCCGTGGCG
AGTCTCCATGTCTCAAGTTGTACGAGGATGATATGTGTTTGTGTATTTTGGACACGAGTCCACTTATCCATGGGCACTCTTTTATC
ATTCCCAAGTTACATTATCCTACCTTAGAGGAAACACCTCCCTCAGTAGTTGCTGCCATGTGTTCCAAAGTTCCTTTTATCAGTAA
TGCCCTCGTCAAAGCTACCGACAGTGATTCATTTAACTTGTTGGTTAACAATGGAGCAGCAGCTGGGCAAGTCATATTTCACACAC
ACATACACATAATTCCACGTAAGGAGCGTGACTGTTTATGGACTTTTGAGAGCTTGCATAGACACACACTGAAACTGGACAAGGAA
GCATTTCAGCTGGCGTTTCGTGTTCGAGAACAATTGTGCAGACCTCCTGAAGAACAATTGGTTCAGCCCTCCTCATAAGTCCCCTT
TTCAAGAGACACGTTGTTGTGAACTTTACAATTACACTCTGCCAACACAAAAAAAGGTCTATTCTGTATAGTTCATATTCACAGCT
TCATCTTCATTTTATATATATATATACATTCTTCAGTCTGG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002863905 histidine triad family protein [Arabidopsis lyrata subsp. lyrata] | 883 | 6e-093 |
| NP_974907 protein histidine triad nucleotide-binding 3 [Arabidopsis thaliana] | 859 | 3e-090 |
| XP_002271191 PREDICTED: hypothetical protein [Vitis vinifera] | 639 | 1e-064 |
| ABK95845 unknown [Populus trichocarpa] | 616 | 5e-062 |
| XP_002303075 predicted protein [Populus trichocarpa] | 608 | 4e-061 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q11066 Uncharacterized HIT-like protein Rv1262c/MT1300 | 231 | 1e-018 |
| P94252 Uncharacterized HIT-like protein BB_0379 | 223 | 9e-018 |
| P95937 Uncharacterized HIT-like protein SSO2163 | 222 | 1e-017 |
| Q58276 Uncharacterized HIT-like protein MJ0866 | 221 | 2e-017 |
| O07513 Protein hit | 218 | 3e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PHJ2 Putative uncharacterized protein | 616 | 4e-062 |
| B9GQP2 Predicted protein (Fragment) | 608 | 3e-061 |
| B9T5H8 Histidine triad (Hit) protein, putative | 596 | 8e-060 |
| Q2QVE2 Histidine triad family protein, putative, expressed | 468 | 5e-045 |
| A2ZJ84 Putative uncharacterized protein | 466 | 9e-045 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G48545.1 histidine triad family protein / HIT family protein | 864 | 4e-093 |
| AT1G31160.1 zinc-binding protein, putative / protein kinase C inhibitor, putative | 122 | 4e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
