Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN01436

FASTA Sequence
Unigene ID: UN01436Length: 941 SSR 
TTTTTCGTCTTCCTCTTCCTCTCAGCTCTAATCATCTCTCTCTCTCTCTCTCTCTCTCGGAGACATTAACGTCACGGACACGCAAT
GGTGAGAAAATGCAGAGAAGCTAAAGAGACGGTCGGAGCTTCGTCTACATATATGCAGCTTCGCAGCCGGAGAATCTTTTACCGAT
CGGAAAAGGAGAGCTCATCGTCTTCTTACTGCGCAAGTAACAACAATGGAGTTATAGATCTGAAGTTGTTACAGGAGGAAAGAGAT
GGTGAGACCGAAACGTCGTCGTGTCGACGGAGTAGTAAGAGGAAGCTATTTGAAAGCCTTACAGAGAAAGAGTCGAGCAAATCTAT
GGAGAACTCACAGCAAACCGTAGCTGGTTTTGAATCCGCCGTGAAAGAATCATCGGATTGTTGTTGCAGCCGGAGAACATCTTTGT
CGACGACGGAGGAGAAGGGGAAATCAACGACGGAGCAACCGCCAACGGCTGAGGAGATTGAAGAGTTTTTCGTGGTGGCTGAGAAA
CAGGTCCATGATAAATTCAAGAAGAAGTATAACTTTGATTTCGAGAAGGAGAAGCCATTAGAAGGACACTACGAGTGGGTTAAATT
ATCATCAGAGTAATGAAGGAAATGAAGACGGTGATGAAGCATACGTTTATTAACTTTTAGTGTCTAATTTTCAGAGAATAATTCCA
ATTTTATTATTTGTTTCTAAGATAGAAGCTTTTGTGAGGAAAGACTTGTAGCAGAATGTTTGAAAGTACGAATCTGCACAGAAAGA
AATGATTTTTTTGGGGATGTTTCAGAACAGATTTTTGGTTTTCTGCAAAAGTGGAAAAGATAAACCCAGAAAAGTCGTGTCTTTTT
GCTTAACTCTTTCTCTTCTTCTTCTCCTCTCATGTTGTACAGTTTTGTTTTGTTTTGTGGACAATATATTTCTGTATCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880500 hypothetical protein ARALYDRAFT_481213 [Arabidopsis lyrata subsp. lyrata]4788e-046
NP_179924 cyclin-dependent kinase inhibitor 1 [Arabidopsis thaliana]3792e-034
AAM62967 cyclin-dependent kinase inhibitor protein [Arabidopsis thaliana]3792e-034
AAC49698 cyclin-dependent kinase inhibitor protein [Arabidopsis thaliana]3712e-033
BAD43255 cyclin-dependent kinase inhibitor protein [Arabidopsis thaliana]2215e-016

Swiss-Prot top hits (Blast detail)Scoree value
Q67Y93 Cyclin-dependent kinase inhibitor 13791e-035
Q9FKB5 Cyclin-dependent kinase inhibitor 31352e-007
Q94CL9 Cyclin-dependent kinase inhibitor 71343e-007
Q283L0 Cyclin-dependent kinase inhibitor 51308e-007
Q67J15 Cyclin-dependent kinase inhibitor 61253e-006

TrEMBL top hits (Blast detail)Scoree value
Q8GUA2 Cyclin-dependent kinase inhibitor1847e-012
Q93V92 CDK/cyclin inhibitor1793e-011
Q93YF6 CDK/cyclin inhibitor1775e-011
Q6T2Z0 Cyclin-dependent kinase inhibitor 2;2 (Fragment)1669e-010
Q9FS28 Cyclin dependent kinase inhibitor1632e-009

Arabidopsis top hits (Blast detail)Scoree value
AT2G23430.1 ICK1; cyclin-dependent protein kinase inhibitor3791e-036
AT5G48820.1 ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE); cyclin binding / cyclin-dependent protein kinase inhibitor1352e-008
AT1G49620.1 ICK5; cyclin binding / cyclin-dependent protein kinase inhibitor1343e-008
AT3G50630.1 KRP2 (KIP-RELATED PROTEIN 2); cyclin-dependent protein kinase inhibitor/ kinase inhibitor/ protein binding1235e-007
AT3G24810.1 ICK3; cyclin-dependent protein kinase inhibitor1172e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information