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Information for unigene UN01439

FASTA Sequence
Unigene ID: UN01439Length: 711 SSR 
GGGTGCCTCTCTGTTTCATTAGCTCATTTAAAAAAGAATAAAACATAAAAAATGTGAACCCCTTGTGGCATTTGGGAGAAAGCCAG
GCACCACGGCCTTTGTTTTCATCGATGAATGAATAAACTAACCAAATAACTAAATCAGAATATTCGCTTGGACGAACCAGATCGAT
CCACATTGCAGCAGGTGAGGGACTCCTGCATTTTCTCCCATCCGTCGCAAGAAATATATATATATATTTTTTTTTTGCCGTCAATA
AGGAGATTGCTTGGCTCTGTTTCTGAATCGAATTGAGAAAAAGAAAAAAACAATGGGGAGCTTGGGGACGTTACTGAGATATCCGG
ATGATATATATCCGCTGCTGAAGATGAAGCGAGCGATCGAGAAAGCGGAGAAGTAGATCCCGCCTGAGCCACACTGGGGTTTCTGC
TACTCAATGCTTCACAAGGTTTCTCGTAGCTTCTCCCTCTTTATCCAGCAACTTCGTCCCGAGCTTCGTAACGCTGTCTGCGTCTT
CTACTTGGTTCTTCTTGCTCTTGATACTGTCGAGGATGACACAAGCATTCAAACTGATGAAAAGCTGCCCGTCCTGTTTGCTTTCC
ACCGTCACATTTACGATACTGACTGGCACTATTCATGTGGTACGAATGAGTACAAGTTTTGATGGATCAGTTTCATCATGTTTCTG
CAGCATTTTTGGAACTTGAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869133 hypothetical protein ARALYDRAFT_912921 [Arabidopsis lyrata subsp. lyrata]5701e-056
NP_195190 Squalene synthase [Arabidopsis thaliana]5691e-056
BAA22559 squalene synthase [Glycine max]4973e-048
AEA41712 squalene synthase [Eleutherococcus senticosus]4939e-048
AEA41713 squalene synthase [Eleutherococcus senticosus]4939e-048

Swiss-Prot top hits (Blast detail)Scoree value
P53799 Squalene synthase5696e-058
P53800 Squalene synthase4568e-045
O74165 Squalene synthase2094e-016
Q32KR6 Squalene synthase2085e-016
P53798 Squalene synthase2085e-016

TrEMBL top hits (Blast detail)Scoree value
O22107 Squalene synthase4972e-048
A5C8Q7 Putative uncharacterized protein4911e-047
Q3LRW9 Squalene synthase4911e-047
D4NYR1 Squalene synthase4901e-047
A4F3N9 Squalene synthase 24892e-047

Arabidopsis top hits (Blast detail)Scoree value
AT4G34640.1 SQS1 (SQUALENE SYNTHASE 1); farnesyl-diphosphate farnesyltransferase5696e-059
AT4G34650.1 SQS2 (SQUALENE SYNTHASE 2); farnesyl-diphosphate farnesyltransferase4657e-047

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  50%
 
111  50%

Unigene MembersMember information