 |
Information for unigene UN01521
| FASTA Sequence |
| Unigene ID: UN01521 | Length: 956 |
SSR | | GGATTCCCTTGAATCTCTCTCTCTCTCTGGGTAAATTCGTCACCGTCTCCTCCAAATCTATCTTCGTCGTCTCATCTGTCCTCTGC
TTCGATAACAAGAGGAAACACAAAAAAAAATAAAAAAAATTGGGAGGGATGGGACAAGCATTTCGTAAGCTATTCGATACTTTCTT
CGGCAATCAAGAGATGAGGGTGGTGATGCTGGGGCTGGATGCTGCTGGGAAAACTACTATTCTCTACAAACTTCACATCGGAGAAG
TTCTCTCTACTGTTCCCACCATTGGATTCAACGTTGAGAAAGTTGAGTACAAGAATGTGATGTTCACGGTTTGGGATGTCGGTGGC
CAAGAGAAACTCAGACCTCTTTGGAGGCACTACTTCAATAACACTGATGGTCTTATATACGTGGTAGACTCTTTGGACCGAGAGAG
GCTTGGGAAAGCAAAGCAAGAATTTCAGGAGATCATAAAAGACCCATTCATGCTCAACAGTATCATTCTGGTCTTTGCAAACAAAC
AAGACATGAGAGGAGCCATGTCACCGAGAGAAGTATGTGAAGGGTTAGGCTTATTTGATCTCAAGAACAGGAAGTGGCACATACAA
GGAACTTGTGCTCTTCGTGGCGACGGCCTTTGTGAAGGCTTGGATTGGTTATCATCTACGCTTAAGGATGTCAAAGCCGCTGGATT
CACCTCCGTCGGACCCTCGTTCTAACTCTTTCACGCTGGTATCAAAGCAGTAATCACACCAAAACAAAATCAGAACCACTAAATCC
TTTTGTTAGGGAAGGAATCATCCTTCTCTCATGGTGCCAAACCTTACAATAGACTCAATTTGACTACTTTTTTTATTTTATTTTGG
ATCATGCTGCCATGAGAGCCTTCACTGTATATTATGTTGATGAAGTTTGTATCATCTCTAAACGTTCCCTTTTGGGGTCATCTTTT
GTCCGATTGG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871747 hypothetical protein ARALYDRAFT_488569 [Arabidopsis lyrata subsp. lyrata] | 997 | 6e-106 |
| NP_197208 ADP-ribosylation factor B1B [Arabidopsis thaliana] | 988 | 6e-105 |
| NP_186962 ADP-ribosylation factor B1C [Arabidopsis thaliana] | 958 | 2e-101 |
| XP_002319891 predicted protein [Populus trichocarpa] | 923 | 2e-097 |
| XP_002520016 ADP-ribosylation factor, arf, putative [Ricinus communis] | 923 | 2e-097 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P91924 ADP-ribosylation factor | 628 | 2e-064 |
| P61209 ADP-ribosylation factor 1 | 626 | 3e-064 |
| P61210 ADP-ribosylation factor 1 | 626 | 3e-064 |
| Q61LA8 ADP-ribosylation factor 1-like 2 | 624 | 4e-064 |
| Q10943 ADP-ribosylation factor 1-like 2 | 624 | 4e-064 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LFJ7 ADP-ribosylation factor-like protein | 988 | 4e-105 |
| Q9M9N1 Putative ADP-ribosylation factor | 958 | 1e-101 |
| B9I8G3 Predicted protein | 923 | 1e-097 |
| B9S1Z7 ADP-ribosylation factor, arf, putative | 923 | 1e-097 |
| Q5FYS3 ADP-ribosylation factor | 922 | 2e-097 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G17060.1 ATARFB1B; GTP binding | 989 | 2e-107 |
| AT3G03120.1 ATARFB1C (ADP-ribosylation factor B1C); GTP binding | 959 | 6e-104 |
| AT1G70490.1 ARFA1D; GTP binding / phospholipase activator/ protein binding | 595 | 9e-062 |
| AT1G23490.1 ATARF1 (ADP-RIBOSYLATION FACTOR 1); GTP binding / phospholipase activator/ protein binding | 595 | 9e-062 |
| AT1G10630.1 ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F); GTP binding / copper ion binding / phospholipase activator/ protein binding | 595 | 9e-062 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
