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Information for unigene UN01534
FASTA Sequence |
Unigene ID: UN01534 | Length: 892 |
SSR | | GCCGGAGCGGCTGAGAAACAAGTCACGGCTACAGTTCAGTCATGCGGACAGAACTGGAATGCTGCTACTCCAAGCACTGCTTCAAA
CGTGTGGAATTCGAACTCCGGTCTGGTGTCTTTCACAGACAACCAAGAAATAGACTTCCTAGATCTCTTTAGTCCAACCTTCAAAT
TCAACTTTGCCTCTAATACCACGGATTGGCAACCCATTGTAACCGGACCTGACGAGTGTGACGAGTCAGTGTCGGATCTTTTGGCG
GAAGTTGAAGCTATGGAGTCCCAAAAACGTCTATCTTCTCCAACTTCAACATTCCGTGGTCCTGGAGAAATGCTCCAACAACACTC
CATCAACGATAGCAGCTTCAGTCCTGCTGCAGAAGGGCACAGCCCAGCATTTGATGTAAGTAAAGGTGACTCCATGAGCTCCACAA
ACGACCTGCATATGCGTTTACGAACTAACAACGTCCTGGACTTTTTGCCGTGGGGGGTTTAGATATAGAGAATCATATCAGGGCTC
ATAGGTTGTACCCAAGATCGATGGTGAACTATGCTCTCTCTACTCTTTTTGCAGGATTGTCATTACGGAACATAAATAAGTGGCCA
ATCATCATCATCAGCAACAGCAGCAGCAGAAAAAGAAAAAAAAAGAGTGGTGCATAAGAAGAAGATCTGTTCAAATGTTTCTTGGT
GATATTTTTGTGTGCTGCACCGACCATTGTTTTTGGTATCTAGGTTCTGTACGTTATCCTGTTTTAAGATTTGCACAGACTCAGCT
TGTGTATTTTCTACATTGTTTGTGTACTTAGGGTAAATTATAAAAGTGTCAATGGGTGTAATCAAAACACTGTAGGGATCATTACG
TATTCTATATATATATATATGATAATTTGGTA
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GenBank top hits (Blast detail) | Score | e value |
AAD20117 unknown protein [Arabidopsis thaliana] | 681 | 2e-069 |
NP_849971 PHD finger, SWIB/MDM2 and GYF domain-containing protein [Arabidopsis thaliana] | 681 | 2e-069 |
XP_002884113 PHD finger family protein [Arabidopsis lyrata subsp. lyrata] | 681 | 2e-069 |
XP_002533810 nuclear receptor binding set domain containing protein 1, nsd, putative [Ricinus communis] | 174 | 1e-010 |
XP_002267100 PREDICTED: hypothetical protein [Vitis vinifera] | 174 | 1e-010 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9SD34 Zinc finger CCCH domain-containing protein 44 | 141 | 4e-008 |
TrEMBL top hits (Blast detail) | Score | e value |
Q94JX1 Putative uncharacterized protein At2g18090; T27K22.4 | 681 | 2e-069 |
Q9SL38 Putative uncharacterized protein At2g18090 | 681 | 2e-069 |
B9T6E1 Nuclear receptor binding set domain containing protein 1, nsd, putative | 174 | 9e-011 |
B9MXJ1 Predicted protein (Fragment) | 173 | 1e-010 |
B9HFD4 Predicted protein (Fragment) | 171 | 2e-010 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT2G18090.1 PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein | 681 | 9e-072 |
AT3G51120.1 DNA binding / nucleic acid binding / protein binding / zinc ion binding | 141 | 4e-009 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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