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Information for unigene UN01534

FASTA Sequence
Unigene ID: UN01534Length: 892 SSR 
GCCGGAGCGGCTGAGAAACAAGTCACGGCTACAGTTCAGTCATGCGGACAGAACTGGAATGCTGCTACTCCAAGCACTGCTTCAAA
CGTGTGGAATTCGAACTCCGGTCTGGTGTCTTTCACAGACAACCAAGAAATAGACTTCCTAGATCTCTTTAGTCCAACCTTCAAAT
TCAACTTTGCCTCTAATACCACGGATTGGCAACCCATTGTAACCGGACCTGACGAGTGTGACGAGTCAGTGTCGGATCTTTTGGCG
GAAGTTGAAGCTATGGAGTCCCAAAAACGTCTATCTTCTCCAACTTCAACATTCCGTGGTCCTGGAGAAATGCTCCAACAACACTC
CATCAACGATAGCAGCTTCAGTCCTGCTGCAGAAGGGCACAGCCCAGCATTTGATGTAAGTAAAGGTGACTCCATGAGCTCCACAA
ACGACCTGCATATGCGTTTACGAACTAACAACGTCCTGGACTTTTTGCCGTGGGGGGTTTAGATATAGAGAATCATATCAGGGCTC
ATAGGTTGTACCCAAGATCGATGGTGAACTATGCTCTCTCTACTCTTTTTGCAGGATTGTCATTACGGAACATAAATAAGTGGCCA
ATCATCATCATCAGCAACAGCAGCAGCAGAAAAAGAAAAAAAAAGAGTGGTGCATAAGAAGAAGATCTGTTCAAATGTTTCTTGGT
GATATTTTTGTGTGCTGCACCGACCATTGTTTTTGGTATCTAGGTTCTGTACGTTATCCTGTTTTAAGATTTGCACAGACTCAGCT
TGTGTATTTTCTACATTGTTTGTGTACTTAGGGTAAATTATAAAAGTGTCAATGGGTGTAATCAAAACACTGTAGGGATCATTACG
TATTCTATATATATATATATGATAATTTGGTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAD20117 unknown protein [Arabidopsis thaliana]6812e-069
NP_849971 PHD finger, SWIB/MDM2 and GYF domain-containing protein [Arabidopsis thaliana]6812e-069
XP_002884113 PHD finger family protein [Arabidopsis lyrata subsp. lyrata]6812e-069
XP_002533810 nuclear receptor binding set domain containing protein 1, nsd, putative [Ricinus communis]1741e-010
XP_002267100 PREDICTED: hypothetical protein [Vitis vinifera]1741e-010

Swiss-Prot top hits (Blast detail)Scoree value
Q9SD34 Zinc finger CCCH domain-containing protein 441414e-008

TrEMBL top hits (Blast detail)Scoree value
Q94JX1 Putative uncharacterized protein At2g18090; T27K22.46812e-069
Q9SL38 Putative uncharacterized protein At2g180906812e-069
B9T6E1 Nuclear receptor binding set domain containing protein 1, nsd, putative1749e-011
B9MXJ1 Predicted protein (Fragment)1731e-010
B9HFD4 Predicted protein (Fragment)1712e-010

Arabidopsis top hits (Blast detail)Scoree value
AT2G18090.1 PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein6819e-072
AT3G51120.1 DNA binding / nucleic acid binding / protein binding / zinc ion binding1414e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  67%
 
111  33%

Unigene MembersMember information