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Information for unigene UN01563
| FASTA Sequence |
| Unigene ID: UN01563 | Length: 1206 |
SSR | | CAAACCAAATCAAACTGAGATAAGAGGCGTTCTTTTTTTTTTGAGTTCATGATACAAAACAAGCTACTTGGTTTCACAAAGAAGAT
ACAACAAATAAAGATCGAGAAAACAAACAGGGAAAATTTCCAATTGAGCAACTCAAGACACTGTTAAAGAGTTAAAAAACTAGGAC
AGTGTCGAATGTTCTCAAAGCAAGTCACTCACACTAGGATAAGATTATGAGTCAGAAACAGAAAGATTTTCTCTGATTCCTGTCTA
TTCAACATTACTCTCCCCTCAGGCAACCAATTCAGATTCTGCAGGAACATGGTTTTGGAAAAACGTTTTGTAATCCAAACTCCTCG
CGGTTTCAAAGAAATGAGCCACGGCTTCCTCTGGCGTCCCTACCAAGACACCATGTCCTAAGTTGAGTATATGCCCTTTTGGTCCA
GCACTCTTCACCACTCTTTGGATTTCTTCGGTTAAAGCAGGAAGCGGAGAGAATAGGTAAGCTGGATCAACGTTCCCCTGCACGCT
AACATCGCTCCCCAGTCTCCTCCTCCCATCAGCCATATCTACAGTCCAGTCAAGTCCAATAACATCAGCTCCTGTTCCTTTCATCC
GCTCAAGAAGTCCACCGTTTCCATTTATGTAGAAAACTATCGGCGTCTCTGGACATCTTCTCTTTACATCATGAATAATCTCCTCG
ATGTAAGGTTTGGACCAACGCTCCCACATCTCAGGAGTCAACTGTCCACCCCACGAATCAAATATCTGAATGCAGTGAGCTCCGTG
CTCGACTTGGTACACAACATACTCCGTAATAGCTTTGGTCAAATGGGACAAGAGAGCTCTCAGCACATTAGGTGCAGTATGACACA
TACTCTTGATCACCGTATACGTCCGAGTCGTTCCTCCTTCAACTATATAAGTCGCTATCGTCCAAGGCGCTCCAACGAAACCCAAA
ACAGCAGCTTTGACCAATAGTGGATCTGAGGATGAAGAGGAGGAGGAGGAGGAGGAAGCTATGACGAGGTTGCGAGGAGCGTTAGT
GTGTCTTCTTGGATATGAAACTAACCCCACATTGATGGGACTTGAACGGAGCCCTATTGGTAACGATAAGCCCGAGGAGTAACATC
TCGACGAGCTGCAGGCACTGGTTGGGGATGATAAACTCATTCTCACACACAGAAGGAGCCTGAAGTTCGAAGATCAAACTGCTGTC
CC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882903 hypothetical protein ARALYDRAFT_478916 [Arabidopsis lyrata subsp. lyrata] | 1138 | 4e-122 |
| NP_974316 uroporphyrinogen decarboxylase 1 [Arabidopsis thaliana] | 1128 | 5e-121 |
| NP_566495 uroporphyrinogen decarboxylase 1 [Arabidopsis thaliana] | 1128 | 5e-121 |
| AAL15294 AT3g14930/K15M2_7 [Arabidopsis thaliana] | 1128 | 5e-121 |
| XP_002331805 predicted protein [Populus trichocarpa] | 1004 | 1e-106 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93ZB6 Uroporphyrinogen decarboxylase 1, chloroplastic | 1128 | 2e-122 |
| Q9AXB0 Uroporphyrinogen decarboxylase 1, chloroplastic | 925 | 8e-099 |
| Q42855 Uroporphyrinogen decarboxylase (Fragment) | 610 | 3e-062 |
| Q10LR9 Uroporphyrinogen decarboxylase 2, chloroplastic | 609 | 3e-062 |
| O81220 Uroporphyrinogen decarboxylase, chloroplastic | 609 | 3e-062 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9N974 Uroporphyrinogen decarboxylase (Fragment) | 1004 | 9e-107 |
| B9SGB6 Uroporphyrinogen decarboxylase | 1002 | 1e-106 |
| C5XR61 Uroporphyrinogen decarboxylase | 929 | 4e-098 |
| B8ABY1 Uroporphyrinogen decarboxylase | 925 | 1e-097 |
| C0PE71 Putative uncharacterized protein | 894 | 5e-094 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G14930.1 HEME1; uroporphyrinogen decarboxylase | 1128 | 2e-123 |
| AT3G14930.2 HEME1; uroporphyrinogen decarboxylase | 1128 | 2e-123 |
| AT3G14930.3 HEME1; uroporphyrinogen decarboxylase | 1128 | 2e-123 |
| AT2G40490.1 HEME2; uroporphyrinogen decarboxylase | 605 | 9e-063 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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