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Information for unigene UN01566

FASTA Sequence
Unigene ID: UN01566Length: 908 SSR 
GAAAACAATCTACCTTCAAAGAAAATCTCAAGTTCCCTTTTTAGTTCTTCGCCTACATTAACCAACAACAAATAGAAGAAATAAAA
TAATTGTTTTTTTTCTTGGTTTTTCAAGAATTCCTAACATTAGAAGAATGCCAAAGATTACAAAATCTAAGCGGGAAAGCTAAAAT
GTCTTCAACATATCCATGCAACCTTTTTAAGTGCCTCTTTGATCATTCCTGGTGTTGCTATTTTTGAACCCTTGTGCTTGCAACTG
ACGGTTAAGCAGATCAAACCGTCTCCGGTCGAGGATTGTACCGAATGCGAATCCAAGTTGAGATTACTAATCACATCCATTATCTC
AAGCAAAACTCCTTCTCTCCAAACACATCTCATCTCAATAATCACCTCGTTACCAAATGGACTGATCCTTAAATTATCGGTTAAAC
TGGTTTCTGTTGGTTCGGTTTGTCCAACATGAGTTCTTTTCCCGTAGCCGATTTCATTGTTTGTGCAATTAGCTGATGTTCTTTCG
CCTGCATCATAAGGTTTCTTCCTCTTCATTGTTGTTGTCCCACGGGTTTCTGTATCGGTCGATTCTCTGCATGATTCTAGTTCTTG
AACCCGTTTCTCTAGTTCTTGAAGATATCCAATTGTATCATCAAGAATCGATACTTTATCGCTCTTATTGATTGAAGGAATGATTG
ATCTCAAGATCAAGAGCCGTTCGTTCAGTTTCTCCCGCCGTTTCTTCTCTAAAACCGCGTGGTTCGCAGTTTCATCCCCAGCCCCT
GGTGAATCCAACATCAGCTTCTCTTTCTGGTGCACTCGTGGAACCTCGAAAATAATCTTCTTCAACATTCCTTGTGATGGTGGTAC
AACTGATGCGGTCCAATGATGATGATGATGATGATGGTTCTCACTGTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870642 hypothetical protein ARALYDRAFT_493847 [Arabidopsis lyrata subsp. lyrata]9975e-106
NP_680372 transcription factor GLABRA 3 [Arabidopsis thaliana]9771e-103
XP_002887946 hypothetical protein ARALYDRAFT_474990 [Arabidopsis lyrata subsp. lyrata]8022e-083
NP_176552 transcription factor EGL1 [Arabidopsis thaliana]7889e-082
BAJ34303 unnamed protein product [Thellungiella halophila]7791e-080

Swiss-Prot top hits (Blast detail)Scoree value
Q9FN69 Transcription factor GLABRA 39775e-105
Q9CAD0 Transcription factor EGL17884e-083
Q8W2F1 Transcription factor MYC13224e-029
P13526 Anthocyanin regulatory Lc protein3207e-029
P13027 Anthocyanin regulatory R-S protein3135e-028

TrEMBL top hits (Blast detail)Scoree value
C0SV14 Putative uncharacterized protein At1g63650 (Fragment)7886e-082
C4WRH0 Putative transcription factor6552e-066
B9GKH2 Predicted protein4964e-048
Q9ATD8 GHDEL614875e-047
Q9ATD7 GHDEL654552e-043

Arabidopsis top hits (Blast detail)Scoree value
AT5G41315.1 GL3 (GLABROUS 3); protein binding / transcription factor9783e-106
AT1G63650.1 EGL3 (ENHANCER OF GLABRA 3); DNA binding / transcription factor7893e-084
AT1G63650.2 EGL3 (ENHANCER OF GLABRA 3); DNA binding / transcription factor7893e-084
AT4G00480.1 myc-related transcription factor (MYC1)3224e-030
AT4G00480.2 myc-related transcription factor (MYC1)3224e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
111  50%

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