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Information for unigene UN01573

FASTA Sequence
Unigene ID: UN01573Length: 1135 SSR 
CCAAACCCACAAAAATTAAACTTCTCTACCCGAAAGCAAGCGAGGTTTGTTAAAAATAAAAGCAAAAGGATCTGCTTTCACAAATC
ACTAGCGTCTCTAAAGCCAATTATAAAAAACAAAGTACAAAAGCTATAAAGTAGTGGCAACAGCTTCAGGTTGATGAGGAAGTATC
TGATGAGCCGGGGGGACATTGCTCTTGGACTTCTTACCCACAGGGCTCGCTCTTGATTCCTTCACCGGTGTTACCTTCTCCGCGAG
AACTTTCCTCACCTCATTCCCCAGCTCTATGACATACTCCTCCTCATGCCCGATGTCGTGCATTGCCTTCTCTAGCAGGAAAAAAT
AATCTCTGTTGTTACCACATGGTCCATTGGCTGTCGCAATTTGTCTTGCCATGTCTTCTAATGGCGCAGGTCCAAGGTAATACTTG
TTGGAGACTTGTCTGGAGTAGAAGTGAATACTATCACTCCAGTTACAGATGGCTTCAGGGGATCATCTTCGTTGTAAAAGTCTACA
CATGTCTTGAGATCATATTCACACTCTCTACGTTCCAGGTACTCCATAGCCAGACGTTCTTCTTCGGGCCCTCCACGGACACAGAA
AGCAGCACCCCAGCATATGGCTTCTTCATCTTTCTCGAGTGTGCAAGTTCTTGCAGGGTGTTCTGGTGTACCTCTGTGATCAATGC
AAGCAAGATCAAAGACACGTTTATATCCCTTGATGAAACCCAACACTTTCTCATCGTAATGAAATCCTGGGTTCCACACAAGAGAG
CCATAACCAAAGACCCACATCACCATCTTCTGCAGTTAACTGCTTAAATGCTGGAGGAGAGGAGACCCAAATAAATCAAAATCAAG
ACGTTACCGTTGGGGACGATCTTGGTGAAGAGGAAAACGCAATTCCACGGGTAGACAAGATCTCCTTTCGTAAATTAAAACCCGAA
ATAAAACTGAGAGAAACTGGTGGGAGGAGAGATTCCAGAGGATGGTAGAGGGAACGACGTCGTTTAATGTTTATGTTCGAATGGAG
CTGGTAATGGTGATGAGACCACTTAGCTCCTTTTTTCTCCCTCCTTTCTCTCTGAATCTCTCTCTCTCTCTTATTTTTTTTTCTCT
CTCTGCTTTCGAGTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869338 hypothetical protein ARALYDRAFT_491614 [Arabidopsis lyrata subsp. lyrata]6544e-066
NP_567871 chaC-like protein [Arabidopsis thaliana]6446e-065
AAM65482 unknown [Arabidopsis thaliana]6357e-064
XP_002283203 PREDICTED: hypothetical protein [Vitis vinifera]5774e-057
CBI20802 unnamed protein product [Vitis vinifera]5774e-057

Swiss-Prot top hits (Blast detail)Scoree value
Q5ZI66 Cation transport regulator-like protein 22268e-018
Q8R3J5 Cation transport regulator-like protein 12241e-017
Q4KMJ1 Cation transport regulator-like protein 22195e-017
Q9BUX1 Cation transport regulator-like protein 12187e-017
Q8WUX2 Cation transport regulator-like protein 22161e-016

TrEMBL top hits (Blast detail)Scoree value
Q84MC1 At4g312906444e-065
Q8LAB4 Putative uncharacterized protein6355e-064
A9PIU2 Putative uncharacterized protein5721e-056
A9PG60 Putative uncharacterized protein5674e-056
B9NA24 Predicted protein5621e-055

Arabidopsis top hits (Blast detail)Scoree value
AT4G31290.1 ChaC-like family protein6442e-067
AT5G26220.1 ChaC-like family protein5573e-057
AT1G44790.1 ChaC-like family protein3234e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  33%
 
102  67%

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