Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN01585

FASTA Sequence
Unigene ID: UN01585Length: 1228 SSR 
AGTAGAGAGATGAGCATTTTAACATCATTACTAAGGTTATTTCTTTTTCCTAATATATAAATACAACATAACAATGACTCCACATA
CAATTCTTTTCCTCTTTGAGTTTAGTACATTATAATCTAAGATGAGAGGTAGTGTCATAAAGAACAACTGACACCTGAAATACACA
CATCATTTGCTCGTAATATAACGGTTCGTACCGTGCTTTGCCCAATGGTCCTTGAGATCAACAGGGTCTGAGAGATCAGGATGCCC
TTGTGCAGCAAGCCTGCTTAGTAGCTTGTTGAAGGCGCTCCCACTCATTTTCCTTCCACCAACTCTGGCATGTTTTTTGTTGGGCA
GTGCTGGTAAAGGATGCATTGAAAGCGTGGTCGTGCAACACGATGACTGCCAACCTCCGTTTCCCCATTTGTAGCACTGTCTGAAA
ACTCCTGTGCATGAACAGACAGGTGGTGGCATTGTCGTCTCGTCATACACAGCCTGGTTAAGCCCCGCCATTTCTTGACTTCTCCA
ATCCGATTTAGATCCTGCTGCTTCTTCTTCTTTGACGTAGCCAAGGGTTGTTGTCTTCACAAACATGATCTTGCTCAAGTCGTCGT
CTTCCTTCTCTTTCTTAACCTTCCTTTGATTCTTTGTCCCTCTCTTACTAGCAGCAGTGTTCTTTGGATCTCTCACTCGTTTGCCA
CGTTTTGGTTTCGCAGATTCCAAGGCTAATTGTGATGTAAGGAGACCACCATCTGTCTCATATGATGTAAGCATGTGATGTTGCTG
ATGATGGTGCATGTGCTTTGCAGCAGAAGAAGCAGCGGAAGCCATGGAGCTGTCACGGAACTGTAACGCTGCGAGAGCAGTGTCTC
TCTCCATGACCGCATTGATATGCTCAGCGATGGCAGTGTCTCGCTGGAGAAACGCCATGTCTCTTTCGGCTACGGCTGATTTTCTC
TCTGATATAGCTAGGTTCCTCTCCTGGATCGCTGCGTCGCGCTCTGCTATTATCGACATCACTTGTTTCATCGATGGCTGATGCTG
CTGCTGCTGCATCATCCACTGGCCCTGTGGTGCTTTATGCCGACCATCATCCATTTGAGAGTTACTAGCTAGGGAAGAGGCTTTCG
TTTACTGCAGCATAGGTGGTGAAGTGGAAGATACAAAGTAGCAGAAAGAAAGAAAGAAAGAAAGAAAGAATACACAGATTCGGATG
GTTTTGGGAGAGGAAGAGGGAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAB10493 unnamed protein product [Arabidopsis thaliana]10892e-116
ABC25623 GAGA-binding transcriptional activator [Olimarabidopsis pumila]8812e-092
NP_001078690 basic pentacysteine 6 [Arabidopsis thaliana]8803e-092
NP_568605 basic pentacysteine 6 [Arabidopsis thaliana]8742e-091
ABP96709 GAGA-binding transcriptional activator [Brassica rapa subsp. pekinensis]8642e-090

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FIG5 Gb|AAF18661.110891e-116
Q2PQR5 GAGA-binding transcriptional activator8812e-092
A8MQZ4 Uncharacterized protein At5g42520.28802e-092
Q8L999 At5g425208741e-091
A5A510 GAGA-binding transcriptional activator8641e-090

Arabidopsis top hits (Blast detail)Scoree value
AT5G42520.2 ATBPC6; DNA binding / transcription factor8819e-095
AT5G42520.1 ATBPC6; DNA binding / transcription factor8754e-094
AT5G42520.3 ATBPC6; DNA binding / transcription factor8012e-085
AT2G21240.1 BPC4 (BASIC PENTACYSTEINE 4); DNA binding / transcription factor4803e-048
AT2G21240.2 BPC4 (BASIC PENTACYSTEINE 4); DNA binding / transcription factor4803e-048

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  33%
 
122  67%

Unigene MembersMember information