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Information for unigene UN01600

FASTA Sequence
Unigene ID: UN01600Length: 1080 SSR 
GAGGTTTATATTTTTTTTTTCCGCTGAATTATATTATTAAATTTTCAAAGCAAAAAGTTCTAAACAATGAGAACCAACAAAACAAC
AATAAGGTTTATCTTCGTGCAATGAAAAGAAGACAAATGAATATGTAAAAGCATATATATGCACAAAGAATGAGAGTTTGAGACAA
TGCAATCTTTTAGAAACTTGGTTTGTTGATGAAGTCTGTGTCCACCGAGCTAACAGGAACAACAGCAGGAGCTTTAGATGAAGTGT
CATCAAGCTGAATAATCTCTTTCCTCCCCTCTCCTCCATTCTCAGCTCTAACGGCCTTTGTCACTGCACCGAACGCGTTTGATAAC
CAAGAAGCTCCGCTCGAGACGTAAGGGTTAGCCATCAGAGCTGTCCCTGCGCTGATCGCTCTCTCCTCAGCAGCTGCTAACGCGGA
TTTCGTGATCTCCCTCACTTGATACCGTTCGTCCACCTCTCTCAGCTTCTCGTTCACCACGGTTGTTCCCATGCTTAGCTTCTCGC
TCAGACCAATCTTGCTGTCGAGGGAGGCGATGGTTGCCGAGGCGTTGGAGACCAAGTTGTGTTTGTCGTCAAAGGCTTTGGCTTTC
TCCATGGCGTCTTTGCCGACGGCGTAACCTCTTTCCATCATAATACTTACTACATGTTCAGCTTTCTTGACAGTGAAGCCATTGAA
TGAGTATTCCGAGTCAAGTGCAAGGGCTTCTGGTGGTAGCTCGTAGTTCACAGCAGGTGTAATACTAACACGATGATCAGCAATGA
CAGCTCCCGTTAAGAGCATAGCAGTTTCTGCGCCTTGTGGATCCTTGAAAGTAACATAAGCAAGCTGAGTTTCTTGCGTCTCGCTT
CGCATCTCGATGTAGTGAATGTCACCAGAGAAAGAAAAGAACTCATTGAGATCTTTCTTGGAAACGTTGAGTGAAACGTTGCTAAT
CTTCACAGTTTTCACAGGGGAAGTAGTAGTAGTAGTAGTAGGCTGGGAATCCATGAGGATGTTGTGGTGAGATTGATGATCTAAAG
GAATGAAAGCAGCCGACATTGTCGCAGGAGCGGTGGAGAAAGTGTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_849858 RNA recognition motif-containing protein [Arabidopsis thaliana]10901e-116
XP_002887163 RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata]10882e-116
NP_564915 RNA recognition motif-containing protein [Arabidopsis thaliana]10863e-116
NP_849859 RNA recognition motif-containing protein [Arabidopsis thaliana]10783e-115
BAC42423 unknown protein [Arabidopsis thaliana]9969e-106

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q3ECG4 Putative uncharacterized protein At1g67950.210908e-117
Q8LAY5 Putative splicing regulatory protein10862e-116
Q3ECG3 Putative uncharacterized protein At1g67950.310782e-115
Q8GY99 Putative uncharacterized protein At1g67951/At1g679509966e-106
Q9C9W1 Putative uncharacterized protein T23K23.208953e-094

Arabidopsis top hits (Blast detail)Scoree value
AT1G67950.1 RNA recognition motif (RRM)-containing protein10913e-119
AT1G67950.2 RNA recognition motif (RRM)-containing protein10904e-119
AT1G67950.3 RNA recognition motif (RRM)-containing protein10806e-118
AT1G67950.4 RNA recognition motif (RRM)-containing protein9077e-098
AT4G17720.1 RNA recognition motif (RRM)-containing protein6093e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  50%
 
112  50%

Unigene MembersMember information