 |
Information for unigene UN01638
| FASTA Sequence |
| Unigene ID: UN01638 | Length: 1030 |
SSR | | GGATCCAACTTCCCAAGCGTTGAGAACCGAACCCTAGATTTGATATCCCTAGTCTGCATCTGACGATGGAATTCACTCCAGCCGAT
TTCGATAGGCTTATGATGGTCGACCTCGCTCGAAACGCTTGCGAGGAACAGTACATGAAGGATCCTCTGGATTCTGAGAATTTGCT
AAAGTGGGGCGGAGCATTGCTTGAGCTTTCACAGTTCCAGAGTGTTGCTGATGCCAAGCTCATGTTAGATGTTGCTCTATCCAAGT
TCGAGGAGGTATTGAAAATAAACCCAGGGAAGCATGAGGCTCTTTGGTGTCTTGGCAACGCCTACTCTTCCCAAGCGTTTCTTAAT
CCAGACTCCGATGAAGCCCAAGCTCTCTTTGATAAAGCCGCTGATTATTTCCAGAGAGCTGAAACTTTGGATCCAGGTAATGAGAT
GTATCTCAAGTCCATGGAAGTTGCAACAGAGGGGCCTAAACTGCATAAGGAGATACATAAGCATGGTGGAATGATACAGCAGGAAC
TAGCTGGAGGAGGAGGAGGAGGAGGTCCCTCTGCTTCATCAAATGCTAGCGGTGGTGGTAAGAAGAACAAGAAGAAGAAGAACAAT
GACTTCACTTACGATGTATGCGGTTGGATAATTCTCGCCTTTGGGATTGTTGCTTGGGTTGGCATGGCTAAATCCCTTGGCCCTCC
ACCTCCCCCTGCTAGATAAAAAAAAAAGCCCCGAGTAATGAAACGCCATTCCATGAGATGAGAGGATAATAATGCTCTGCTTATTC
GATTTCCCCAACAGAGAACGGTTCTAAAGTTGAATAGATCTTTTAACGTTTCTGGTGGCTATAATTGGTTTTGTTTCGTTTACTCA
GCCCAGCAAACTGTTTTTGTTTACTTAATTACATTAGGATGGTTTGTTACTTGGTCTATTTCCGAGTAAAGAGCAAACTATGTTTT
GGTTTTGTGATACCAACACATTTTCTTTCTCTCTGTGTTTCACAGAAGGTGCTATAAGAATAAGCTCCGATGAAGCTCTAAACT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002893465 F17L21.18 [Arabidopsis lyrata subsp. lyrata] | 759 | 2e-078 |
| NP_174059 mitochondrial import receptor subunit TOM20-2 [Arabidopsis thaliana] | 686 | 7e-070 |
| CAC14429 TOM20-2 protein [Arabidopsis thaliana] | 682 | 2e-069 |
| AAF99745 F17L21.18 [Arabidopsis thaliana] | 675 | 1e-068 |
| ACU24169 unknown [Glycine max] | 625 | 9e-063 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P82873 Mitochondrial import receptor subunit TOM20-2 | 686 | 3e-071 |
| P82874 Mitochondrial import receptor subunit TOM20-3 | 466 | 1e-045 |
| P92792 Mitochondrial import receptor subunit TOM20 | 438 | 2e-042 |
| A2WYG9 Probable mitochondrial import receptor subunit TOM20 | 404 | 2e-038 |
| Q5JJI4 Probable mitochondrial import receptor subunit TOM20 | 318 | 1e-028 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6TMM7 Putative uncharacterized protein | 625 | 6e-063 |
| C6SW69 Putative uncharacterized protein | 602 | 3e-060 |
| B9GJU0 Predicted protein (Fragment) | 588 | 1e-058 |
| B9RBI0 Mitochondrial import receptor subunit TOM20, putative | 566 | 4e-056 |
| B9RMF2 Mitochondrial import receptor subunit TOM20, putative | 566 | 4e-056 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G27390.1 TOM20-2 (TRANSLOCASE OUTER MEMBRANE 20-2); P-P-bond-hydrolysis-driven protein transmembrane transporter/ metal ion binding | 686 | 3e-072 |
| AT3G27080.1 TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3); P-P-bond-hydrolysis-driven protein transmembrane transporter | 467 | 7e-047 |
| AT3G27070.1 TOM20-1 (translocase outer membrane 20-1); P-P-bond-hydrolysis-driven protein transmembrane transporter | 316 | 2e-029 |
| AT5G40930.1 TOM20-4 (TRANSLOCASE OF OUTER MEMBRANE 20-4); P-P-bond-hydrolysis-driven protein transmembrane transporter | 304 | 6e-028 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
