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Information for unigene UN01645
| FASTA Sequence |
| Unigene ID: UN01645 | Length: 2035 |
SSR | | CGCCGTTCGACGGCAATCTCGAATTTTTTTCCCCCACACGGCGGGCGATTCGCTCCGTGATGACTTGAACCGCCGATTACCCAACA
ACTTCCACTTTCCCCACAAACCCTAAGCTTTACTGTAGCATTGGTTCCCAAAACCCCCCCCGCTTGGGATTCGTGCTTTTCGCTAC
CTCGATTTCGTCCCCGATCTGCTCGAACTAGGGAAGACGAACCTGCAGCGATCTATTTCAAAGCCTTGTTTTCATTTCCCCCAAAA
ACCTCAATAATGATGACCTGTTTGTGCTTGGGAGAACGGTCTTAGTTTATTAATTTAGCAGAGTTGGTTTAATATATATTGGAGTT
GAGTCTGGTTCATCTATCAACAATGGAAGCATACAGAGAGGAAGCTATTAGAGTGAAACAGGTCGCCGAGAGGAGATTCGCGGAGA
AAGATTTCACTGGCGCCAGGAGCTATGCGTTGAAAGCTAGGTCTCTGTTTCCTGATCTGGAAGGTTTGACTCAGATGATTGCGACT
TTTGAAGTTTACCTGGCTTCTCAGTGTAGAAGCGGCGCCGGTCAGATCGACTACTACGCCGTGCTTGGACTGAAACCCTCTGCTGG
GAAAAGAGACGTGAAGAAACAGTACAAGAAGATGGCTGTCCTGCTCCATCCGGACAAGAACAAATGCATCGGAGCTGATGGCGCGT
TCCATCTCATATCTGAAGCTTGGAAGTTCTTGTCAAATGAGTTCAACAAGAGCACTTTTTACTACAAAAGAAGGAAGCATATCGAG
TCTACGGTGGTTCAGAAGCACCACCGCGCAGAGTACACGCCACCGGGGACTGCAGCATTTGATCGGTTTCCATCATCATCATCATC
AGAAAGACTCGACACTTTCTGTACTGTGTGCACCTCTTGCAAAGTTCAGTACGAGTACCTGAGGAAGTACGTGAATAAGAGGCTTT
CGTGTAAGAACTGCCGCGGAGCATTTATAGCTGTGGAAACCGGTCCAGCTCCTGTTAGTGCACCGTTTCATTACACGCCTCCATCT
CATGCGCCTCCTCCTCCTCCTCTTCATAGTAATGGCTATAGCTCACATAGCTACGATGCACGCATGCCCACAAGTTCCACGTATCT
CTTAGGCCACTATCCTACGCAAGGACATGGATATGAATATGGTTCATATGATTGGACCTCATCATCGTACCCTGAAACAACCACCT
CCCCAGGGAATCTTGATTTGAAGCGTGTGTCCTCTGTGTCCAATGGGTATCCTTACAAGCACAGCAAATCAGTCGTTAGCACGGGG
ATAAATAAAGTTAAAGACGGTTCCAACGGGACATGCTCGATGAAAACCAAACCAGATGGTCTGATCTATGCTAACCCGCCTGGCCT
TTCTACTCATACGGCTGCAGTTAAGGTCGGCAGACCTGAGAAGAAGAGCAGAGTATTTATTGAATCGTCTGTTAATGGATTTGTTG
AGAACCCTTTGATGAGATCTTCTGCTCCAGCGTCAAAGACAGCGAACGCAGATTTCAAAATTCACGGGCAAAGCTATGGTTCAACT
AGGCGGTGGTCTGCTGCATCAGTATTGGATACACGCAAGCCACTGCTTCAGAAGGCAAGAGCAGATATTAAGCAAAGACTGGATAT
CATAAGATTGGCTTCAGAGGCAGCAGCAGCAGCAGCTGTAGAAGACCCGACACCAGTTGATTCCTGTAAGTTGGGAGATGTCACGG
CGGGGCGCGAAACCAGTGGGCCTATAACGGTACCAGACTCTGATTTCCATGATTTCGATAAAAACAGATCGGAGGAGTGCTTTGAG
CCAAGACAAATATGGGCAATCTACGATGAAGATGATGGCATGCCACGCCTGTATTGTGTGGTTAGGGAAGTGCTCTCTGTTGAGCC
CTTTAAGATTGACATAGCCTACTTGAGCTCCAAACCGACATCGAGTTTGGTTCCATGAAGTGGTACAATACGGGTTCACAAATCGT
GCGGACATTTCAGATACAGACTATGACATAGTGACAGTCACATATCTCGCATCTTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885794 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 2142 | 3e-238 |
| NP_565321 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] | 2141 | 4e-238 |
| XP_002530227 heat shock protein binding protein, putative [Ricinus communis] | 901 | 2e-094 |
| NP_680345 uncharacterized protein [Arabidopsis thaliana] | 471 | 2e-044 |
| XP_002319580 predicted protein [Populus trichocarpa] | 397 | 6e-036 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q7ZXQ8 DnaJ homolog subfamily B member 14 | 145 | 4e-008 |
| Q9Y2G8 DnaJ homolog subfamily C member 16 | 143 | 7e-008 |
| Q5RCM7 DnaJ homolog subfamily C member 16 | 143 | 7e-008 |
| Q8CP18 Chaperone protein dnaJ | 143 | 7e-008 |
| Q49Y21 Chaperone protein dnaJ | 143 | 7e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9S7L6 At2g05250/F5G3.15 | 2141 | 2e-238 |
| B9IAS0 Predicted protein | 1167 | 2e-125 |
| B9SW58 Heat shock protein binding protein, putative | 1058 | 9e-113 |
| B9NHM7 Predicted protein (Fragment) | 752 | 3e-077 |
| B9GTF7 Predicted protein | 736 | 2e-075 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G05250.1 DNAJ heat shock N-terminal domain-containing protein | 2141 | 1e-240 |
| AT2G05230.1 DNAJ heat shock N-terminal domain-containing protein | 2141 | 1e-240 |
| AT5G35753.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05250.1); Has 372 Blast hits to 224 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 372; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 470 | 7e-047 |
| AT5G53150.1 heat shock protein binding / unfolded protein binding | 339 | 1e-031 |
| AT5G37380.1 DNAJ heat shock N-terminal domain-containing protein | 334 | 4e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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