Information for unigene UN01651
| FASTA Sequence |
| Unigene ID: UN01651 | Length: 724 |
SSR | | GGACTCTGAAGTATGAACCACGTCGGACGAACCAAAATGTATAGAAATCTCTGGACCCGGTTTAGTACTCAATCTCTCTCAGTCTC
TGGTCTTGCACCTCTCGCAAACACAGAGTCTGTTAACCGTCTCAGACCTCTTCGTAACCCAATTTCTCTCTCTCTCTCTCTGAAGT
TCACAGAGTTCGTTTACCGTGACCACCAGTTGGCATTGTTTACAAATCTTTTCGCCGGAATAACCAGGAAGATGAGTGGTGGTGAA
GTTGTTGTAGCTGCTGCTGCTAGAGTTTACCGTGGCCTTTTTAAAGCAGTTGCGAAACATGTTGGCAAAGAAGACCACAAGTCTCA
TTTCACAGATTTTGTAAAGAACGAGTTTCGGAAGAATGCACACTCAGTCGAGAAAATCAACCTTGCCCGGAACTACACTTATTTTT
TTAACAGCATTCACTCTCACAAGGATTTGTTGTTTTCATACAACATTGCAGTTGATAGAACTGAAGAAATGAAGGGAGTGCTTGGC
AAATTTGCAGCTAGTGTTGGGCTTCGTCTTCCCGAGGTTTACCAGCCTTGATCATCATCCCCACTTTCCTCCTTGTCTTTCCTCTT
TGTTTCCTTTACAGATCTTAGGTAACTTTGGAATAAGTTTGTCACTCTTTGTAGCCAGACAGATCTGAGATGCATTGATCACAATT
TCTTTTTATTTGTACCACATTCGTTTTGGGATAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200009 uncharacterized protein [Arabidopsis thaliana] | 424 | 9e-040 |
| XP_002864143 hypothetical protein ARALYDRAFT_918234 [Arabidopsis lyrata subsp. lyrata] | 414 | 1e-038 |
| XP_002864465 hypothetical protein ARALYDRAFT_495744 [Arabidopsis lyrata subsp. lyrata] | 413 | 2e-038 |
| ABM54450 unknown [Brassica juncea] | 395 | 2e-036 |
| XP_002523900 conserved hypothetical protein [Ricinus communis] | 343 | 2e-030 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FJ96 At5g51960 | 424 | 6e-040 |
| A1Z284 Putative uncharacterized protein | 395 | 1e-036 |
| B9SD31 Putative uncharacterized protein | 343 | 2e-030 |
| C6T1D6 Putative uncharacterized protein | 317 | 2e-027 |
| B9HLY5 Predicted protein | 307 | 2e-026 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G51960.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP synthase assembly factor FMC1, mitochondrial (InterPro:IPR018471); Has 18 Blast hits to 18 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 425 | 3e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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