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Information for unigene UN01701
| FASTA Sequence |
| Unigene ID: UN01701 | Length: 807 |
SSR | | GGGAGAGAGAGAGAGAGAGATGTGTTAAACTCAAATCTCCCGTGTCTTGTACGGTCAGTATCAATCATAATCGGTGGACGCGACTT
TTCGCCGGAGGAAGCAGTCAGAGAGAGAGACACGGCGAAAGCGGAGGAAGAAGAAGAAGAGCGTGGAGAGAGTCTTCCTCTCTCGA
CAATGAGGAATCCTGTTCTTCCTGTCTCCGATCCTCCTCTCTCCGGAGAGAATGATAATACCTCCGACGGTAAAGGCGTCGACGAT
CGCCTCTTCAAAGGATCCGCCATGACCAAACGCGGCGCTTACGCTGCTCTCTCTTACATGGCCTGCGCTGTGATGCTTGTGCTGTT
TAACAAAGCGGCTCTCTCTTCGTATCAGTTCCCTTGTGTTAATGTTATCACACTCTTTCAGATGGTGTCATCTACCTTCTTTTTAT
ATTCATTGAGGCGCAAGAAGATCATCTCTTTCGCAGCGGCTGATTCCTTTTCTGGTAGTGCCTCAGCTTTTGTGCCGTTGAAGACG
TTGTTTCACACGCTTCCTCTATCAATAGCCTATCTTATGTACATGCTAGCTTCTATGGCGTCTGTCAGAGGAGTTAATGTTCCCAT
GTACACCACGCTTAGGCGTACCGCTGTGGCGTTTACCATGGTGATTGAGTATATGCTCACAGGTCAGAGATATACTCGGTCTATCA
TTGGAAGTGTTGGCGTTATCATCTTTGGCGCATTTTCGCCGAGCAAGGGACTTGTCATTCGACTTCTATGGATATGCTATTGTCTC
TTAGCTAAATAACAACAGCAGTGTATCTAGCAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_001078479 UDP-sugar transporter-like protein [Arabidopsis thaliana] | 807 | 4e-084 |
| XP_002867249 hypothetical protein ARALYDRAFT_491505 [Arabidopsis lyrata subsp. lyrata] | 777 | 1e-080 |
| XP_002515502 UDP-sugar transporter, putative [Ricinus communis] | 596 | 1e-059 |
| XP_002308668 predicted protein [Populus trichocarpa] | 584 | 3e-058 |
| ACU20948 unknown [Glycine max] | 575 | 4e-057 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8MRY9 Uncharacterized protein At4g32272.1 | 807 | 3e-084 |
| B9RP33 UDP-sugar transporter, putative | 596 | 9e-060 |
| B9HAF2 Predicted protein | 584 | 2e-058 |
| C6TGJ6 Putative uncharacterized protein | 575 | 2e-057 |
| C5XXM5 Putative uncharacterized protein Sb04g025940 | 542 | 2e-053 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G32272.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-related (TAIR:AT4G31600.1); Has 1302 Blast hits to 1300 proteins in 174 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 239; Plants - 567; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). | 807 | 2e-086 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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