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Information for unigene UN01727
| FASTA Sequence |
| Unigene ID: UN01727 | Length: 1496 |
SSR | | CAAAAAGCAAACTTCTTTACAAATAAATGTATTTAACTTCCTCAGGACAATACAAGAATACAAAAACATACCAAGCTCCATCAGAG
CTCTCTTTATTACAGAACAAAATAATAAAAAAAATCCCTACATCGGAAATCAACCACCGAGAGAGAGAAATAGGAGAGCTTCCGAA
ACAAAGTTCCAAGTGTCCAATAATTTGTTTTTTTTTTCAGTTCCCGAAAATACATATGCTAAAGAACGATAGAACAACAAAACACA
CACAGAAAATAAAAGTACCTTCGGGGAAAAATCTTGTGGTTGGTGGGTTACACTCTCATTCAGCTCTAGACTGGCCAGCTCTTGAG
GAGAGGATGATTCCCACAATAAGGCCGTAAAGAGCAAGCGCTTCTGCGAAGATAAGGATAAGAATCATCCCGACAAAGAGCTTAGG
CTGCTAAGCATTTGCCCTGACACCGGCATCACCGACAATCCCAATGGCCATACCAGCAGAAAGACCAGCAAGACCACAAGCAAGAC
CGGAGGAGAGATGTGCGTACCCATCGAAGAGGTAGTAAGACTTGGCCTTGGGGTTAATCCCGGTACTGATGATAACAGCAATAATC
AAACCGTAAATACCCAATACACCAGCCATGACAACGGGGACGATGGACTTCATGACCAGCTCTGGCCTCATGACTCCCATAGAAGC
CACACCAACTCCACTCTTTGCTGTTCCATAAGCAGCTCCCATACAGGAGAAGACGAGTGCGGCGGCAGCGCCGAGGAAGCCGAAGA
AAGGAGCTGTTTCATCGCCGCTGAAGGTAGACATGTCGAAGGCTTGTGATTTGGATCTGAGATCAGGTCGATGATTCAAATCTGGC
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGAGAGAGAGAGGAGATGGAGTTCGATGGGTAAGAAAGGAGGAGACGCGACGG
TCGGTCACCACTACCGCTCGTCATAACCACCTCCGATTGAACCTTGTCACCTCCTCCTCTATCAAACCCCTCTGAATCTCCAACCC
TTGTCACCACCACCATCTCTACTCAGATCCATCTTGACCGGAGTCGCTACAACCACCGTTCGTCATAACCACCACTGGTCACATCT
CTGTCTCTCTCATCGATTTGGAGTATACTTCTCAGACGCAAGAGTTACAAGAGGGATGAAATGGAAGTGGTGGTGGTGAGATGGAA
GTGGTGGTGGTCTCGGCATCAACAGTGGTAGTCTCGGCGTCGACAATGGTGGCTGTGTGCGGTGGAGGAGATTGAAGAAGCTTGCT
GTGGTGGTCGTGGCTGGTGGTATGGGCGTCAACAAGGGGTGCGGCGGAGATGAAGAAGAACGTGGTTTAGTTAGGGTTAGTTAGGT
TTAGTTAGGGTTGGTTAATAAACCGGATTTGTATGTAAACCAGTTTTTGTAATAAACCGATATCATTTTGTAAACCAAAATTTCAA
TAATAAATAATTTTATTCTCAGACCAAAAAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_179244 V-type proton ATPase proteolipid subunit c1/c3/c5 [Arabidopsis thaliana] | 796 | 2e-082 |
| XP_002313006 predicted protein [Populus trichocarpa] | 796 | 2e-082 |
| XP_002279080 PREDICTED: hypothetical protein [Vitis vinifera] | 793 | 5e-082 |
| XP_002310846 predicted protein [Populus trichocarpa] | 792 | 6e-082 |
| NP_564098 ATPase, F0/V0 complex, subunit C protein [Arabidopsis thaliana] | 791 | 8e-082 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P59227 V-type proton ATPase 16 kDa proteolipid subunit c1/c3/c5 | 796 | 9e-084 |
| P59228 V-type proton ATPase 16 kDa proteolipid subunit c2 | 791 | 4e-083 |
| Q43434 V-type proton ATPase 16 kDa proteolipid subunit | 791 | 4e-083 |
| Q96473 V-type proton ATPase 16 kDa proteolipid subunit | 788 | 8e-083 |
| Q40585 V-type proton ATPase 16 kDa proteolipid subunit | 787 | 1e-082 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5C5A3 Putative uncharacterized protein | 796 | 2e-082 |
| A9P9J2 Predicted protein | 796 | 2e-082 |
| B9HRF1 Predicted protein | 796 | 2e-082 |
| Q6IDA4 AT4g34720/T4L20_300 | 796 | 2e-082 |
| A5ANS5 Putative uncharacterized protein | 793 | 3e-082 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G16510.1 vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5) | 797 | 6e-085 |
| AT4G38920.1 ATVHA-C3 (VACUOLAR-TYPE H(+)-ATPASE C3); ATPase | 797 | 6e-085 |
| AT4G34720.1 AVA-P1; ATPase/ proton-transporting ATPase, rotational mechanism | 797 | 6e-085 |
| AT1G19910.1 AVA-P2; ATPase/ proton-transporting ATPase, rotational mechanism | 792 | 2e-084 |
| AT1G75630.1 AVA-P4; ATPase | 785 | 2e-083 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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