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Information for unigene UN01756
| FASTA Sequence |
| Unigene ID: UN01756 | Length: 1441 |
SSR | | CTCCTCTCCCTCAACATTCAGAAAGAGACGACGACAAGAGCAGCAGACGTTTCGTCCGTGCCCTTCCTCCTCCTCCTCCTCCTCTT
CTTCCTTTTGTTGCTTACAACTCAGAAGTAGAATCTCTCTCGCAAGGCAATGTTGGGCTGGAAAAAGATAATCAATTATGCTGCTG
CTGGCTGTGTAACAAACATGTCAGTTCTTATTGTGACAAGTCTTGGGGACATTGTCATTGATTTGTACTCCACTAAATGCCCTTTG
ACTTGCAAGAACTTCCTCAAGCTCTGCAAGATCAAGTACTACAATGGGTGCCTCTTCCACACTGTGCAAAAGGATTTCACTGCTCA
AACTGGTGATCCTACTGGTACTGGACTTGGCGGTGATTCCATCTACAAATTGCTGTATGGTGAGCAGGCTCGCTTTTTTAGAGATG
AGATTCATCTCGATTTAAAACACTCCAAAACTGGCACTGTTGCTATGGCTAGTGGTGGAGAGAATCTCAATGCTTCCCAGTTTTAT
TTCACACTTCGTGATTATCTAGACTATCTTGATGGGAAACATACAGTGTTTGGGGAGATTGCTGAGGGGCTTGACACGCTGACTAG
GATAAACGAAGCTTATGTTGATGCCAAAACAGACCTTATAAAACATTAGAATCAAGCACACTTATATACTTGAAGATCCCTTTGAA
GATCCCACACAACTGGCTGAGAGGATACCAGATGCTTCCCCGGAAGGAAAACCCAAGGAAGAGGTTGAAATTGACGTGCGTCTTGA
AGATGATTGGGTTCCCATGGATGAACAACTTGATGTTCATGAACTGGAGGAGGTTATCCGTGAAAAAGCTGCTCATTCTAGTGCTG
TTGTACTTGAAAGTATAGGAGATATCCCAGAGGCCGAGGTCAAGCCTCCTGAGAATGTACTGTTTGTCTGCAAATTGAATCCTGTG
ACTGAGGATGAGGATCTGCATACCATTTTCTCACGCTTTGGCACTGTTATATCGGCTGATGTAATCCGGGATTTCAAAACCGGTGA
CAGTTTGTGCTACGCTTTTATAGAGTTTGAGGAAAACGCGGCATGCGAACAAGCATATAACAAGATGGGCAATGCTCTGATAGTTG
ATAGAAGAATACATGTGGACTTCAGTCAGAGTGTATCCAAACTTTGGTCACAGTTCCGGCAGAAAGGCTCACAAAAGGGTAAAGGA
GGGAATGGATGTTTCAAATGTGGGTCGGCGGATCATGTAGCCAAGGATTGTGTGGGTGGTGGTAATCAGGGTTCAAAGTTCATCGT
AAAAGACCAAAACAGACAGCACGGAGGAGGTGAAGGGTATGATATGGTGTTTGAGGGAGATATAGCTGAAAGGCCCAAGAGGGAGA
AGAGAGAGCATAGTCATGACAAGGACAAGATTCGGAGCAGACGTCCTCGTGGCTATGGTGAAGGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002891769 hypothetical protein ARALYDRAFT_474506 [Arabidopsis lyrata subsp. lyrata] | 1167 | 2e-125 |
| AAL24306 Unknown protein [Arabidopsis thaliana] | 1129 | 5e-121 |
| NP_175776 cyclophilin 59 [Arabidopsis thaliana] | 1129 | 5e-121 |
| AAG51976 hypothetical protein; 15173-12677 [Arabidopsis thaliana] | 1068 | 6e-114 |
| CBI21690 unnamed protein product [Vitis vinifera] | 1005 | 1e-106 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q2U256 Peptidyl-prolyl cis-trans isomerase-like 4 | 513 | 6e-051 |
| Q9CXG3 Peptidyl-prolyl cis-trans isomerase-like 4 | 507 | 3e-050 |
| Q8WUA2 Peptidyl-prolyl cis-trans isomerase-like 4 | 506 | 4e-050 |
| Q4IE79 Peptidyl-prolyl cis-trans isomerase-like 4 | 501 | 1e-049 |
| Q4WAQ9 Peptidyl-prolyl cis-trans isomerase-like 4 | 494 | 9e-049 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6Q151 Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase | 1129 | 3e-121 |
| Q93YQ8 Putative uncharacterized protein (Fragment) | 1129 | 3e-121 |
| Q9C8M7 Putative uncharacterized protein F22G10.24 | 1068 | 4e-114 |
| B9H633 Predicted protein | 990 | 5e-105 |
| B9RI22 Peptidyl-prolyl cis-trans isomerase, putative | 981 | 5e-104 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G53720.1 CYP59 (CYCLOPHILIN 59); RNA binding / nucleic acid binding / peptidyl-prolyl cis-trans isomerase | 1129 | 2e-123 |
| AT2G36130.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 318 | 2e-029 |
| AT3G44600.1 CYP71 (CYCLOPHILIN71); chromatin binding / histone binding / peptidyl-prolyl cis-trans isomerase | 291 | 3e-026 |
| AT5G67530.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | 267 | 2e-023 |
| AT4G33060.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | 265 | 3e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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