RadishBase

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Information for unigene UN01811

FASTA Sequence

Unigene ID: UN01811	Length: 803	SSR
GGGAGAAATAAACACACAAGCATAACTACAAACAGAAGAAAAATAAAAAGAATTGATCAGAAGAAAAGAATGAAGGAGACAAGGAG AGGGAAATAGAGAATAACATCAACGAAGGAAGAAGAAGAAGAAGAAGGAGTGAGGAAAGGGCCGTGGACTATGGAAGAAGATTTGA TCCTCTTCAACTACATCCTTAATCATGGTGAAGGTCTTTGGAACTCCGTCGCCAAAGCCTCTGGTCTAAAACGTACGGGAAAAAGT TGTCGGCTCCGGTGGCTGAACTATCTCAGGCCAGATGTGCGGCGAGGGAACATAACCGCAGAAGAACAGCATTTGATCATTCAACT TCATGCTAAGCTGGGAAACAGGTGGTCGAAGATTGCGAAACATCTACCGGGGAGAATGGACAACGAGATAAAGAATTTCTGGAGGA CTAAGATTCAGAGACACATGAAACTGTCGTCTTCAATGGATAATGCGAATAACATTCGTGACTGCTGGGGAAATTCACAGAGCTCG GTGATGACAACGACGGACCAAGGCAGCTCAAGCAAAGCCTTGGAGAGTTTAAAATCTCCGGATAGGACGAGGACATCGTATAATGT GATGGAACAGCTAACGACAGTTACTGGAGCGTTGAAGATCTATGGCCCGTCCAGTTGTTTAATGTTGACCACCACCAACACCAATT GCTTTAATATACTGAATTAAAAATATGAGTTTGTGAAATTTAAATTGAAGTATACACATACATAAAATATATATCATGAGTGGATG TGAGCCACTGATCTGTATAGATAGTATAC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002882176 predicted protein [Arabidopsis lyrata subsp. lyrata]	700	1e-071
AAM67076 putative transcription factor [Arabidopsis thaliana]	670	3e-068
NP_186802 myb domain protein 57 [Arabidopsis thaliana]	669	4e-068
ACU13920 unknown [Glycine max]	533	3e-052
BAF96932 R2R3-MYB transcriptional factor [Gentiana triflora]	521	6e-051

Swiss-Prot top hits (Blast detail)	Score	e value
Q9LK95 Transcription factor MYB21	512	3e-051
P81391 Myb-related protein 305	500	8e-050
P81396 Myb-related protein 340	497	2e-049
Q9LX82 Transcription factor MYB48	399	4e-038
O22264 Transcription factor MYB12	390	5e-037

TrEMBL top hits (Blast detail)	Score	e value
Q8L8W8 Putative transcription factor	670	2e-068
Q9SSA1 MYB transcription factor	669	3e-068
C6SXE7 Putative uncharacterized protein	533	2e-052
A9ZMI3 R2R3-MYB transcriptional factor	521	4e-051
B9IJM0 Predicted protein	521	4e-051

Arabidopsis top hits (Blast detail)	Score	e value
AT3G01530.1 AtMYB57 (myb domain protein 57); DNA binding / transcription factor	669	2e-070
AT3G27810.1 ATMYB21 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 21); DNA binding / transcription factor	512	3e-052
AT5G40350.1 MYB24 (myb domain protein 24); DNA binding / transcription factor	498	1e-050
AT5G49620.1 AtMYB78 (myb domain protein 78); DNA binding / transcription factor	471	2e-047
AT1G68320.1 MYB62 (myb domain protein 62); DNA binding / transcription factor	463	1e-046

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


12	2			100%

Unigene Members	Member information