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Information for unigene UN01821
| FASTA Sequence |
| Unigene ID: UN01821 | Length: 1323 |
SSR | | TGCTGGTTTTACAAGTTTAGTCTGAGTTTCTTTATTGTTTTTTTTTTTCTAAATTATTCTAAAAAAAGAGGAAATGATGATAAAAA
AAAAAAGTCTTGAAATCAAAAAAATTACACATGACTGAATAATGCATCTTTCATTATGTTGCTAAAAAACCTTATTGACAAGTTTT
AAAAAACAACAAAATTCGAGCTTATTGAAAGGGAAAATACTTTTTTTTTTGCCTGTGATGATGATAAAACTCTTCTTCCTCTTCTT
CGCATATCCTATTATAGCCTCACATTCATTCATTCTCCATGAAATTAGATACTAAGCATGTCTGAGTTTCCCCACATGCTTACAAG
AACTGGGCACTATCATCTTTTCTCACCTCTGGAGGGACTTGTAGAGCACCACAGTGACATACTTGGCCAGAAAACGGTGAGTGGAA
CCAAGAGCAACCACAGACGGACCGCTTTTGCCTTTCTGCATGTAAAGATGGTTGAGGATGACGTGCTGAGGTCTCGGCAGCGGTGA
TGGAATGTCAGGGCTTGCTGGAGGCAGGTTCAGCAGTGTCATCTGCAAATGCGGCGGAACCAGAGGCGGTTCTTTGGAGTAGTCCT
CAGCTCCTAGAAGCAAGCTGCTGTAACTAGCTTCTGGTGATTGCGGTGGCTCAAAACCAGATATGCTTTCAATGTCTTCTGGTACA
TAGTCCTGGAGGTCTAAGAGGTTGAAAGTGTTGCCAGCGTCATCACGAGCGAGAGGGAGCTCAGGGGCATGCCCCCACTGCCCATC
AACGATGAACCTGTACTCATAGACACCTGAAGGTAGGACTTTCATTATAGTGAAGTCTTTCCCAGATCTCTGAAGCCGACTTCTTG
TCTTCCAATTATCCCAAGAACCTTCGACAGCAATCTCCTTACCACCATGGCACCAAGTGATCATGGTGGGGATACCTTGCTCGTTA
CAAGCCTCTTCGTAGGAAGGAGATTGCATCAAGGAAGGGTTAGGGATGTGGATTTCATCTGGTCTTTGAAGAGGAAGCACCGGAAC
CTGAGGAGCAAACATGAGAGGAGATTGAGTGGCGCGAGGTGATTGAGGAGGAGATTGACCCATGAGCTCAGGAGGAGGAGGTGCGG
TGGTGTCGGAAGAAGACATGGGTTGATGAATCTCACCGTCGTTGTTGTCTTCGAGTGGAGATGCGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTGGTGGTGGTGGCTACTGTTCGCTTCGTCTCTCGCGTTCACGTTGCCCATAGAGAGAGAAGAGAGAAGAGAGGATAC
GGACAAAAGAGGGGGTGATCTTAATGCTTTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| Q9SCY5 RecName: Full=SNF1-related protein kinase regulatory subunit beta-2; Short=AKIN subunit beta-2; Short=AKINB2; Short=AKINbeta2 | 1281 | 1e-138 |
| NP_193369 SNF1-related protein kinase regulatory subunit beta-2 [Arabidopsis thaliana] | 1254 | 1e-135 |
| NP_001190741 SNF1-related protein kinase regulatory subunit beta-2 [Arabidopsis thaliana] | 1254 | 1e-135 |
| CAB10413 kinase like protein [Arabidopsis thaliana] | 1251 | 3e-135 |
| XP_002870164 AMP-activated protein kinase [Arabidopsis lyrata subsp. lyrata] | 1247 | 9e-135 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SCY5 SNF1-related protein kinase regulatory subunit beta-2 | 1281 | 5e-140 |
| Q84VQ1 SNF1-related protein kinase regulatory subunit beta-1 | 646 | 2e-066 |
| O43741 5'-AMP-activated protein kinase subunit beta-2 | 194 | 5e-014 |
| Q6PAM0 5'-AMP-activated protein kinase subunit beta-2 | 194 | 5e-014 |
| Q9QZH4 5'-AMP-activated protein kinase subunit beta-2 | 194 | 5e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2V3H9 Uncharacterized protein At4g16360.2 | 1237 | 9e-134 |
| B9IH18 Predicted protein | 1065 | 8e-114 |
| B9HCD2 Predicted protein | 1055 | 1e-112 |
| B9SA62 Snf1-kinase beta subunit, plants, putative | 1049 | 6e-112 |
| Q7XYX7 AKIN beta2 | 998 | 5e-106 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G16360.1 AMP-activated protein kinase | 1255 | 4e-138 |
| AT4G16360.2 AMP-activated protein kinase | 1238 | 4e-136 |
| AT5G21170.1 5'-AMP-activated protein kinase beta-2 subunit, putative | 647 | 1e-067 |
| AT5G21170.2 5'-AMP-activated protein kinase beta-2 subunit, putative | 577 | 2e-059 |
| AT2G28060.1 protein kinase-related | 226 | 9e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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