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Information for unigene UN01827

FASTA Sequence
Unigene ID: UN01827Length: 800 SSR 
GGAGAAAATAAATTTATAGAAATCAAATCGAATTTTACAAATTTACAAACAATAGCAATGCCAATTTTTTTCAATATCTTAAAATA
AAACCAAAACAAAGAATCGTATTATTACTTGTGGTTTTTCTTGAGTAACACACCAAACTTCTTCAACATTTTACCATTCTCAATAG
AATCAGTTCTCTCCTCTTCACTGTTCAGTATAGACGCTGCCGTCTCAGCCGCTTTCCTCCACTGCTCACACTGAACCTTCACTCTT
CTTAGCTCAGCTTCCATGGCTTCAGTGTTTGCTGTCTCAACTCTCTTCTCCATTTCACTTCTCAGCCTCTGCAACTCCATCTCCTT
ATCAACCAAACACCCTCTCACTTCCACTAAATCTGACTCGAGCTTCTTGAAATCTTCAGCAACTTCATATCCTTTGCTCAAAGCCT
CAGTTTCAGTTCTCTTCAGCTCTTCAGCTAACTCTGCCTCTCTCTGTGCACATTTTGTCTTAACCGCCTCTGCTTGTTCGTAAGCG
CTTCTTATCTGCAACGTGCTCTGTATATACTCATCTTGGTACCTTCTCTCCGCTGCTTCAACCGCAGATTTCAACTGGCTTATCTC
TTGCCTCGCAAGTTCCATTGCTTCTTTCAGAGTTTCCACTTCCCCTGATGATGATGATGAGTCTCTAACAAGTTTCTCTAAAGACC
TTGCCTCAAACCTAGACTTCTCTAGCTCGGACTCAGTCTCGAAGAGCTTTGTTTTCAGCTTCTGAACCTCGGTAATGGCACAAGAC
AAAGCAGCTGAGTCCAGTCCGTGTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_974423 interactor of constitutive active ROPs 5 [Arabidopsis thaliana]6821e-069
NP_190903 interactor of constitutive active ROPs 5 [Arabidopsis thaliana]6821e-069
AAL47457 AT3g53350/F4P12_50 [Arabidopsis thaliana]6821e-069
CBI32691 unnamed protein product [Vitis vinifera]3721e-033
NP_181245 interactor of constitutive active ROPs 2 [Arabidopsis thaliana]2716e-022

Swiss-Prot top hits (Blast detail)Scoree value
Q8VYU8 Interactor of constitutive active ROPs 56826e-071
Q9ZQC5 Interactor of constitutive active ROPs 2, chloroplastic2713e-023
Q9M9F9 Interactor of constitutive active ROPs 41477e-009
Q9NS87 Kinesin-like protein KIF151352e-007
Q9LSS5 Interactor of constitutive active ROPs 31342e-007

TrEMBL top hits (Blast detail)Scoree value
B9IJ05 Predicted protein2482e-019
Q8VXD2 P70 protein2321e-017
B9MT88 Predicted protein2151e-015
A2WWP8 Putative uncharacterized protein1991e-013
B9SGR1 ATP binding protein, putative1991e-013

Arabidopsis top hits (Blast detail)Scoree value
AT3G53350.1 myosin heavy chain-related6834e-072
AT3G53350.2 myosin heavy chain-related6834e-072
AT3G53350.3 myosin heavy chain-related6834e-072
AT2G37080.1 myosin heavy chain-related2713e-024
AT1G78430.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: tropomyosin-related (TAIR:AT1G17140.2); Has 36552 Blast hits to 19717 proteins in 1278 species: Archae - 377; Bacteria - 3766; Metazoa - 19812; Fungi - 2701; Plants - 1105; Viruses - 197; Other Eukaryotes - 8594 (source: NCBI BLink).1476e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
71  50%

Unigene MembersMember information