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Information for unigene UN01867
| FASTA Sequence |
| Unigene ID: UN01867 | Length: 763 |
| SNP | CGACTGAATAGTCTCACAGTTTAATTGGATTGGAACTTTGAGATCTGTTACAAAAAAAAAAAGAACTTTGAGATCAATGCCATCCC
ACACTCACAAGGAGGCAGTTTTATTCAGTCTACATTATTGCTGTCATGCGTTGACAGACAATTTTATTCGATTTTGCATTATATAT
TGCCGTGTTACGTCCCCTCGACGCTTTCAGACGATTGAAGAGATGCACTTCCTGTTCTCACACCCTACACCAACACTGGCACTCAC
CGTCTGCGGGCAGTTGTTCCGTTCGACAGATAGCTCATGTGGCGGCTCGTCGACGGCAAGCCACTGCTCTACATCGAAGTACTGAC
GCTTGGTCTCAGCTCCAGCTCTGGTCGTCTTTACCTCCACGTATTCAACATACCAGCCTGGCTTACCACCGGTGCCGTCAGAGTTC
AGATTCAAAAAGCACACTGGGCTCGGAAGACACCGCGCTGTCCCACTGAAAATATCAAGATTGCCGTTCTCGTAGTAGTCGTGACC
TCGTCCCATTACACCACCCCATCTCTCTAGGTCTCCAATGTCGATGTGCTGACCAGTTTTGTCCGAGATTGAAGCCCCTATGATTG
AATCGGTGCCGGAGTCATCTTTCGTTCCGGTTTTGATTTTAAATGTGTAGACGCATTCTTGTTCGGCCAATGCGGCGACAGAGACG
GTGGCGATGAGGAGGAGGGAGAGGAGGAGAGAGTCAATGCGAGCCATAGTTGTTGATATGAATTGTAAGAAATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAM62648 dehydration stress-induced protein [Arabidopsis thaliana] | 517 | 2e-050 |
| XP_002880432 lipid-associated family protein [Arabidopsis lyrata subsp. lyrata] | 517 | 2e-050 |
| NP_565527 PLAT-plant-stress domain-containing protein [Arabidopsis thaliana] | 516 | 2e-050 |
| NP_195683 Lipase/lipooxygenase, PLAT/LH2 family protein [Arabidopsis thaliana] | 479 | 4e-046 |
| XP_002866880 lipid-associated family protein [Arabidopsis lyrata subsp. lyrata] | 473 | 2e-045 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LEG8 Dehydration stress-induced protein | 517 | 1e-050 |
| Q9SIE7 Expressed protein | 516 | 2e-050 |
| O65660 AT4g39730/T19P19_120 | 479 | 3e-046 |
| Q9AXN5 Dehydration stress-induced protein | 468 | 6e-045 |
| B9T4H4 Putative uncharacterized protein | 421 | 2e-039 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G22170.1 lipid-associated family protein | 517 | 7e-053 |
| AT4G39730.1 lipid-associated family protein | 480 | 1e-048 |
| AT5G65158.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976); BEST Arabidopsis thaliana protein match is: lipid-associated family protein (TAIR:AT2G22170.1); Has 83 Blast hits to 83 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 271 | 2e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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