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Information for unigene UN01877
| FASTA Sequence |
| Unigene ID: UN01877 | Length: 774 |
SSR | | CATAAAAACACTAATCAAATATATATATATTTTTAACCTGAAATGTTCCAAAGAGCTCTGGCTCCACCAGAATCATTCGTGAATAC
AAAAGAAAAATTATTTTATTTTGTTTTGGCTAGAGAACCCCTCTTATTCTTTGTCGTGCAGTGTGTTGTATGATATGTATGGACCT
AAGCTGAAGATCCAGCCAAACGTCTTCTTGATGCATTGGAAGTCGAGACTTGACCCAACTTGTCTGAATCCTTTGACTCATCCGTC
CCCACCCTCTCTCTAACCGGTGTGTAATGCCTAAGCCACACGCCTGTGTACACCTGTTGTGGCCTCATGATCTTGGTGTCGGGATC
ATCCAACGGCTCTTTCCAATGAGACAAGTATCCAGCCATGCGAGGAATAGCAAACAAGACAGTGAAGAACTCTGGTGGAAACCCCA
TTGCCCTGTATATTAGTCCAGTGTAGAAATCAACATTTGGATAAAGCTTTCTCTTAACAAAGTAATCATCCGAAAGAGCTGCCTTC
TCCAGAGCAACGGCTACTTCAATAAGAGGATCCCTTCCAACAATGGAGAACACTTCATCCGCTAGCTTTTTGATGACTTTAGCTCT
TGGGTCATAGTTTTTGTACACACGGTGTCCAAAACCAGACATCTTCCTCTTCCTGTTTTTAACACCCTCTATGAACTCCGGAATGT
TTTCAACACTCCCAATCTCTGACAACATCTTAAGCACAGCCTCGTTTGCACCGCCATGAAGTGGACCATAAAGCGCACCCACAGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002881873 hypothetical protein ARALYDRAFT_483376 [Arabidopsis lyrata subsp. lyrata] | 995 | 6e-106 |
| NP_181807 citrate synthase 3 [Arabidopsis thaliana] | 992 | 1e-105 |
| NP_191434 citrate synthase 2 [Arabidopsis thaliana] | 933 | 1e-098 |
| BAJ34181 unnamed protein product [Thellungiella halophila] | 932 | 1e-098 |
| XP_002878238 hypothetical protein ARALYDRAFT_486329 [Arabidopsis lyrata subsp. lyrata] | 927 | 5e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SJH7 Citrate synthase 3, peroxisomal | 992 | 7e-107 |
| Q9LXS6 Citrate synthase 2, peroxisomal | 933 | 5e-100 |
| P49299 Citrate synthase, glyoxysomal | 887 | 1e-094 |
| Q9LXS7 Citrate synthase 1, peroxisomal | 691 | 5e-072 |
| Q8MQU6 Citrate synthase, peroxisomal | 633 | 3e-065 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WUX6 Citrate synthase | 992 | 1e-105 |
| B8AEK0 Citrate synthase | 904 | 2e-095 |
| B9F4F6 Citrate synthase | 904 | 2e-095 |
| Q0E2K1 Citrate synthase (Fragment) | 904 | 2e-095 |
| Q6EUF8 Citrate synthase | 904 | 2e-095 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G42790.1 CSY3 (citrate synthase 3); citrate (SI)-synthase | 993 | 5e-108 |
| AT3G58750.1 CSY2 (citrate synthase 2); citrate (SI)-synthase | 933 | 4e-101 |
| AT3G58740.1 CSY1 (CITRATE SYNTHASE 1); citrate (SI)-synthase/ transferase, transferring acyl groups, acyl groups converted into alkyl on transfer | 696 | 1e-073 |
| AT2G44350.1 ATCS; ATP binding / ATP citrate synthase/ citrate (SI)-synthase | 140 | 4e-009 |
| AT2G44350.2 ATCS; ATP binding / ATP citrate synthase/ citrate (SI)-synthase | 140 | 4e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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