Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN01885

FASTA Sequence
Unigene ID: UN01885Length: 1193 SSR 
GAACAAAACGTTTACAATTGGTTCCAGAACCGGCGTGCTCGTTCCAAGAGGAAGCAGCATGGTGGTGGTGTTGGTTTTTTTAGCAA
CAACAACAACAACAACAACAACGGTGAGTTTGAGGTAGAGACTGACACTGAGACATTGAATGGGAAGAGAAAGATACCAGAGAGTT
TTCGTGTTTTTCCTGATGGAAACAATGCTATTGGGACAACAAGTACTAGTCCTAGGCCTGAAGATCTTTGCTTTCAGAGCCCTGAG
ATGAGCTTTGATTTTCACTTTCTATCAAACCCAAGGGATGATCATCTTGTTGGAAAGATGGGATTGTTTGAAAGCTACAGCCTTTA
TGATCATGTTGAAGACTATGGCATGTCAGGCTGAGTGAAACTTTTAATGATAAGAGAGAGATCAAAGAAATGGATTTTCCTAGTCA
GTTTTAAAGCAATTTTAGACCTTTTTAATATAATTTTTATGGAATGTTGAACTTTTTTAGAGATTGTGCTTTTGATGTTTTCTTCA
ATTATAATAAAATAAAAATAAACAGCTTCAGCTTTTACAGTCTCTCTTCTTTACCCCCAAGTTATTACTACAATTGAAAACATGCA
AAGCTAGCAAAGCATTGTAATGCCCTTTCTCTATTTCTTCGTCCTTCACATCGTGTAAGACCAGAGCCTGTATTACCAAATCCTCC
CAATCAATCTCACATCCTCTCTTCCTTTTCTTCTTCTTGCTATCTTCAACCTCCAAAGACAACTCACTTCTACTAACTTTGTCATC
ATCATCACAAGGATCTTGTATCGCATCAATCCTCAACTTAGCCGCCTTAATCTTCTCTCTTCTTCTTTCCACCGCATCACAACCCT
TTATGTAAGAAATAGGCAAATCATCATCAAGCCCTACATCTTTCTCCAACACTTCCTTGAGTGTAAGTCTTTGACTCATCTTCGAT
TTCCCTTTCCACCAGTCTTCACACGAAACCATCTGAAGAAACGAGCTCCTATGACCTTCACCATCATCATAACAATACATAGCTTC
TTTGCTTAAACAATCCCTCACTATATCCTCCAAACAAACCCCATCACTTATAACCAACTCATCTCCTTTCCTTTCCCTCTTCTTCC
TCATAGACTTAGCTTCCATCAAACCAATCAAAGTCCCTGAATGTTTCACAACATTCTTCACAGTAACATCTCCCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195279 zinc ion binding protein [Arabidopsis thaliana]4539e-043
XP_002867068 homeobox-leucine zipper protein [Arabidopsis lyrata subsp. lyrata]4466e-042
NP_195280 WUSCHEL-related homeobox 13 [Arabidopsis thaliana]4458e-042
XP_002869081 zinc ion binding protein [Arabidopsis lyrata subsp. lyrata]4242e-039
XP_002275055 PREDICTED: hypothetical protein [Vitis vinifera]3419e-030

Swiss-Prot top hits (Blast detail)Scoree value
O81788 WUSCHEL-related homeobox 134453e-043

TrEMBL top hits (Blast detail)Scoree value
O81787 Putative uncharacterized protein AT4g355404537e-043
B9RTZ9 Putative uncharacterized protein3408e-030
A5AQX9 Putative uncharacterized protein3391e-029
A5ARF8 Putative uncharacterized protein3372e-029
B9H3C7 Predicted protein3273e-028

Arabidopsis top hits (Blast detail)Scoree value
AT4G35540.1 transcription regulator/ zinc ion binding4534e-045
AT4G35550.1 WOX13 (WUSCHEL-RELATED HOMEOBOX 13); DNA binding / transcription factor4462e-044

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  50%
 
72  50%

Unigene MembersMember information