RadishBase

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Information for unigene UN01922

FASTA Sequence

Unigene ID: UN01922	Length: 1409	SSR
GCCTCTAAATTGAATTTGGATATATATATATAGTGATAGAGAAAAACAAACCTTTTAGACTATTATTGGTCTTCTACTATAAAAGA AATTATAACTCCCCCAAAAATGTAATGGAAGAGTCCAAAGAAACGAGTGGAAAGATTTGTTTATTGCTAAGAATGACTTATTCAAT CGGTGGGAAAAAGAAAAGTGGAAAGATTTGTTTTCATTTGTAAAGATGTGAAACCTTGTAGGAAGGAAGTGTATGTTCTTGAAATT TGTGTGGTTGTGTTTTACACTGAAGGGTGAACTACAACAGGAGCTTCTACTTGCATCGTTAAGTCTTTAAACTGAAGAGCTATGAT TGGTTTTGATAGCATCACAGCTACGCTTAGTCGCGTTTCACTTTCATGCGACTCTTGTGACGTGTGATTCCTATCTGCCTCATCTT CCAAAGGATTTGATACTACCGCAGGACTCACAGGCCTCACCCTGCAGTGGATGTGGCAAGAGTATTTGAGTAGGTTTGGGTTGTAC TTTGTATTGCCACTAAAACTCGGAAGGGACATTTTAATTGCTGGTCCCATCCACTTTCCTAGTTTTGTCTCTGATTCGTCTGATCT AATTTGGATGTTGCAGATGTTTGCAGAAGCAGCACTGTCCACTTCACTAACTTTAACCTCCATTAAATCCTGAGGGTGAGACAGAG TACTTCCCAACCCAAATGTGTCCAAGAAACCAAAAGCTCTTTCCCTTTTTCTCTTTGGAACTGCAGTGATTTTTTTTGAAAATCTT GCAACTTGGCTTGGGAGTCCTACTTCCTTGCGTCCGTGATGACAAGCCTCGTTGCTGTTGACAAGCACCCTCGCCGCCCATGCGCA TGATGTAGGAGGGTTCCATACAATCCCTGCAATCATGACAAGCTCATCGAAGACACCAGCGGGACTATCATCGTAGCTAGCCAGGA AAAACCCACCAAGAGTGTATCCAAAAGCTTCAACAAGTCGAAGCTCCTTGGGGATGAATGCTCGAGCAGTGGAAGCCTTCACAAGA TGGATCTGGTACAACGCGCTGAAAGCAAAGCAAAGTTAAAAGCAAAAAGCAGAGACATTCTTTAAAAGCTACCCAATAATAAGAGT TTACTTGCCTTCCTTTGAATATCCATGGTGGTTTAGCATAACCAGATGAAACATTCCTTTCTTCAACGTCCATGAAAGTGAACAAA TTAGAGTTCTTAACTACAATTAGCAAAGATCCAAAAGTGATATCAAAGCATCAACAATCTTGTTGCTAAGCCGTCAGGAGAATAAA ATCTTGATGAAGATTCAGATCGAGCGAAGGTTTCGGTGTGTAGATGAGCAGAGTAATTTAAGAAAAAAAAAACTTCGATGTTAATA AAAATGTGGATTTTCCCTTATCTGAATTAAAAT

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_849717 uncharacterized protein [Arabidopsis thaliana]	1145	7e-123
NP_001077614 uncharacterized protein [Arabidopsis thaliana]	1126	1e-120
AAG51493 unknown protein [Arabidopsis thaliana]	1124	2e-120
NP_001077615 uncharacterized protein [Arabidopsis thaliana]	897	4e-094
XP_002303755 predicted protein [Populus trichocarpa]	841	1e-087

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
Q8GWB2 AT1G28100 protein	1145	5e-123
Q9C7E3 Putative uncharacterized protein F13K9.27	1124	1e-120
A8MRP0 Uncharacterized protein At1g28100.5	897	3e-094
B9GZ34 Predicted protein	841	8e-088
B9GMS2 Predicted protein	754	1e-077

Arabidopsis top hits (Blast detail)	Score	e value
AT1G28100.1 unknown protein	1145	3e-125
AT1G28100.3 unknown protein	1145	3e-125
AT1G28100.2 unknown protein	1145	3e-125
AT1G28100.4 unknown protein	1126	4e-123
AT1G28100.5 unknown protein	905	2e-097

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


6	3			60%


11	1			20%


9	1			20%

Unigene Members	Member information