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Information for unigene UN01964
| FASTA Sequence |
| Unigene ID: UN01964 | Length: 892 |
SSR | | GAGCAACCTTTTCTCTCCAGATTAAGGACTTTTAATATGGGTTTAAAATCACTCACTTTTCAATGACTTTGACGAATTCTTCATAG
CTTATCCGACCATCACCATCAACATCACATTCTTGGATGAAGTAGCGAACATGCTCGTCGGTTACCGTGTCCCCATCTTTTGTTAG
CACATATCGAAGTTCTGGTGCAGTTATGAAACCATCGTGGTCTAAGTCTATAGTCTGAAATTCTTCCTTCATCAATTTCGCTTTTA
GTTTTCTCATCATATCTATGGAAATTTTTTCGAGCATCGCAGCTTCATCCTTCCAGTTACAAGAGTGTTCTCCAGCTATGGTTGCT
ATAGATGTCAAAGCTTCGGTCCATCTCCGCTTACGTTCCTCTGTTTCACCATCACAGGATTTCTCAAATGCGACCCCGAAGTCTCC
CTTTTGTTTCCGTACATCTGACGGATCAACGTCATAAAAAAATGGGAATCGCGATCTGCCCGGAAGTTACTTTGCACTCCAAGATT
TCATGCAGTTCATCTAAACACCAGCTCGAGGAAGCGTAATTCTTTGAGAGCAAAACAATCGATGCTTTGGCTTCTCTAATGGCTTG
TACGAGTTCAGATCCGATCACGTGGCCTCTCTCAATCTCCTGATCCTTGAACATCGTGATCTCTTTCCTTTCAAAGAGATTGTGAA
AGTGACTGAGGACTCCTCTACGAACATCTGGCCCGTGGAAGCTCGGGAAGACATAGTGTTTCTTAACGTGAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGTAGAGGAAGAAGAAGAAAAAGAAGCCATGAGTGAGATAGAGAAAAAGAGGATTTGAATAAAGTA
TAACACTGGTTGAGGAAACAAGTCCTCCCCCA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_198989 TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] | 374 | 9e-034 |
| NP_001154757 TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] | 374 | 9e-034 |
| XP_002868589 predicted protein [Arabidopsis lyrata subsp. lyrata] | 369 | 3e-033 |
| XP_002870667 predicted protein [Arabidopsis lyrata subsp. lyrata] | 369 | 3e-033 |
| XP_002868587 predicted protein [Arabidopsis lyrata subsp. lyrata] | 365 | 1e-032 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O82500 Putative disease resistance protein At4g11170 | 281 | 2e-024 |
| P04464 Calmodulin | 191 | 6e-014 |
| P62200 Calmodulin-1/11/16 | 186 | 2e-013 |
| A2WN93 Calmodulin-1 | 186 | 2e-013 |
| Q0JNS6 Calmodulin-1 | 186 | 2e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FFS5 Disease resistance protein-like | 362 | 1e-032 |
| Q9FKR7 Disease resistance protein-like | 358 | 4e-032 |
| Q9FGW1 Disease resistance protein-like | 350 | 4e-031 |
| Q9LSX5 Disease resistance protein-like | 339 | 7e-030 |
| Q9FFS6 Disease resistance protein-like | 338 | 9e-030 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G41740.1 disease resistance protein (TIR-NBS-LRR class), putative | 374 | 4e-036 |
| AT5G41740.2 disease resistance protein (TIR-NBS-LRR class), putative | 374 | 4e-036 |
| AT5G41550.1 disease resistance protein (TIR-NBS-LRR class), putative | 362 | 9e-035 |
| AT5G40910.1 disease resistance protein (TIR-NBS-LRR class), putative | 358 | 3e-034 |
| AT5G41750.1 disease resistance protein (TIR-NBS-LRR class), putative | 339 | 4e-032 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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