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Information for unigene UN01971

FASTA Sequence
Unigene ID: UN01971Length: 697 SSR 
GACTATTCTATGCTGCTTTGCTTTCTCTATCCACATGTCTTCACATCGAAGGAAGAAACGAGATGAGTGTGCTCACAGTTATATAA
TCAAAATCATAGACATACAAATCACAGTGCTGAAGCAGAGTATTTGAAACTCCAAAGACAAAGTCACTCTAAAAAAAATCTGATTA
TAAAGCAGGCAAAAATTTTACAGACGAACGATGATAGTGTTTGGGATCATGCAAAGGCTCGAGGAGTTTTGTGTGTGTGTGTTTTT
TGTTGTTCTAACAAAGCATCCTCCTGATTGCTGTTGAGCCAAAGATGCATTTGCATTGGAAGATTTGAGATTGACATCAACCATGT
CCTCTTGCTTTGTCGAAGACAGTGTTTCCGTTCCTGGCAAAGCTGCTGCTATCTTACGGAAAAGCGCCTTAATGTTGAAGCCTGCT
TTGGCACTGGTTTCGATAAACATCACATTAAGCTCACGAGCCTTAGCTTCTGCTTCCTCTATCGACACTTGCCTTTTGTCCACAAG
GTCGGTTTTATTTCCCACAAGTACAACAATGACGTCACTACCACGCTCGGTCCTAACCTCATCGATCCACTTAGTAGTGTTTAGGA
AGGATTGCCTGCTTGCAACATCATAGACAATAACAGCCTGACAGTTCGGTCTTCAAGGTACATTGTCTTTGATAGAAAATCAATAC
CAATCGTGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_181989 Ras-related protein RABH1B [Arabidopsis thaliana]5905e-059
XP_002526504 protein with unknown function [Ricinus communis]5556e-055
XP_002302484 predicted protein [Populus trichocarpa]5539e-055
AAA74117 putative [Nicotiana tabacum]5521e-054
XP_002266653 PREDICTED: hypothetical protein [Vitis vinifera]5466e-054

Swiss-Prot top hits (Blast detail)Scoree value
O80501 Ras-related protein RABH1B5902e-060
Q1KME6 Ras-related protein Rab-6A3984e-038
P20340 Ras-related protein Rab-6A3967e-038
P35279 Ras-related protein Rab-6A3967e-038
Q5RAV6 Ras-related protein Rab-6A3967e-038

TrEMBL top hits (Blast detail)Scoree value
B9SKH4 Putative uncharacterized protein5554e-055
B9GP45 Predicted protein5537e-055
Q40525 Nt-rab6 protein5529e-055
Q8H4Q9 GTP-binding protein Rab65312e-052
B9SS18 Putative uncharacterized protein5294e-052

Arabidopsis top hits (Blast detail)Scoree value
AT2G44610.1 RAB6A; GTP binding / protein binding5902e-061
AT5G10260.1 AtRABH1e (Arabidopsis Rab GTPase homolog H1e); GTP binding4917e-050
AT2G22290.1 ATRABH1D (ARABIDOPSIS RAB GTPASE HOMOLOG H1D); GTP binding4478e-045
AT5G64990.1 AtRABH1a (Arabidopsis Rab GTPase homolog H1a); GTP binding4137e-041
AT4G39890.1 AtRABH1c (Arabidopsis Rab GTPase homolog H1c); GTP binding / protein binding3959e-039

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  33%
 
72  67%

Unigene MembersMember information