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Information for unigene UN01972
| FASTA Sequence |
| Unigene ID: UN01972 | Length: 781 |
SSR | | TTCAGAAGTGTAATAAACAAAAGTACAGAGATTAAACTGCACTGCAATGTTCAACAAGAGACAAAACAAAACTGAAGCTGAAAGCT
TCAAAATAATTTCAGAAAATTTGCATTTGTTGAGATGTAGTTAGTGAACGCAAAGGAGCACAAACTAACAAGGTAATTAATTAAGG
ATAGCTTGCTTTGTAAGTCCACACAATAATAGTAATTAGCTAATGTTGATCATCATCTTGACAAATTCATCATAGTTGATTTGACC
ATCACCATCCAAATCTGCCTCCTTTATCATTTGTTCAACTTCTTCATCTGTTAGCTTTTCCCCTAGATTTATCATTACATGACTCA
ACTCACTGGCAGAGATATAACCATTTTGGTCTTTGTCAAAGACTTTGAATACTTCTTTCAGCTCTTCTTCTGCATCATTATCCTGA
AGTTTGTTGGTCATGAGGTTAAGAAACTCAGCAAATTCAATGGTGGCATTACCATCGGAGTCGATCTCAGCGATGATATCTTGAAG
TTCTTGTTCTGTTGGATTCTGATCCAACGAGCTGATCACTGTTAAAAGTTCTTCTACCGTTATACGACCTGCTACGTCGCCGTCTT
TGTCGATGAGACAAATAACCTCCTTGAACTCGATAATCTGATCTTTTGTCAGTGCTGTCTCTTCCATTGTTTATGGGTTCGTGAGG
GAGAAGAGAAGAGAGAGAGAGTTCAAGGTTTGAAGTAGTTGATGAATCTCTGATTTATGGTCTATTTGTAGAGTCGTGACAAGAAC
TTTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002870301 hypothetical protein ARALYDRAFT_330049 [Arabidopsis lyrata subsp. lyrata] | 656 | 1e-066 |
| NP_193200 calmodulin-like protein 8 [Arabidopsis thaliana] | 649 | 9e-066 |
| NP_188933 calmodulin-like protein 11 [Arabidopsis thaliana] | 603 | 2e-060 |
| XP_002517054 calmodulin, putative [Ricinus communis] | 602 | 2e-060 |
| XP_002314661 predicted protein [Populus trichocarpa] | 600 | 4e-060 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O23320 Calmodulin-like protein 8 | 649 | 4e-067 |
| Q9LIK5 Calmodulin-like protein 11 | 603 | 9e-062 |
| Q0JNL7 Calmodulin-3 | 535 | 7e-054 |
| Q7DMN9 Calmodulin-5/6/7/8 | 533 | 1e-053 |
| A2WNH1 Calmodulin-3 | 532 | 1e-053 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RTI5 Calmodulin, putative | 602 | 2e-060 |
| B9HUQ2 Predicted protein | 600 | 3e-060 |
| B9HKC0 Predicted protein | 598 | 5e-060 |
| A5BQ65 Putative uncharacterized protein | 591 | 3e-059 |
| Q94IG4 Calmodulin NtCaM13 | 588 | 7e-059 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G14640.1 CAM8 (CALMODULIN 8); calcium ion binding | 650 | 3e-068 |
| AT3G22930.1 calmodulin, putative | 603 | 8e-063 |
| AT2G41110.1 CAM2 (CALMODULIN 2); calcium ion binding / protein binding | 530 | 2e-054 |
| AT2G27030.1 CAM5 (CALMODULIN 5); calcium ion binding | 530 | 2e-054 |
| AT2G27030.3 CAM5 (CALMODULIN 5); calcium ion binding | 530 | 2e-054 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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