Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN01973

FASTA Sequence
Unigene ID: UN01973Length: 911 SSR 
CTCACAACTCATAATATATATAGATAGACACAAGTGAAAAGTGTTTTACATGTAGCCACAACACCAGATCATATAAAGGTAAGTCT
CAACACCAAATTGAAAAGCGAAGACATAATTAGAAGATGATAATAGTCTTATGCCAAGCACACACAATAAAAGACAAGCTTCCACA
TCATTAGGACAATTTCTCAGTCATTCCTCCTTTTCCTTATCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTT
CTCCTTCTCCTTCTCTTTCTCCTTCTCTTTCTCCTTCTCCTTCTCCTTCTCTCCATCAACCTCCTCGACAACAGCGACTCCACCAG
CAGCATTGAGCTTCGCTGCAAGGTCTTCAGCTTCTTCCTTTGTGATATATTGTTTAACAATGGAAGGGACATTTTCAGCAATCTCA
TAACTATCGCCCATGTAAAACTGGTACAATGATGTCTTGTCTTCGGTAGTTTGGGCCCATGCAACTTCTTTAAGCACACTATTATA
ATAAGGCTTTTCACACTCCATCAACTTCACAAGAAACCCTGATCTGCTCTTCTTGGAGTTTTGGGAGGGGTTGGAAGTCCCAACGC
TTCACTAAATATAAACCTAAACTCGTGTTTTTCTTTTATAGTTAGATGTTCCAAAGTCTCAATCAGCGACAAGATTTTCTCAGAAG
GCAATGGTCTATCAAAGAGATCTATCTCCACGAGTCTAGGGAAAGGCCTACCATAAGTTGAATCTATATCATAATCATCATCATAG
GGGGTTGTACACAGCAGACGCCTACTTGGTGCATATGTGACCGAGGGAGAGTAATTTCTTACAATTGATGTTAGGAAGAAACGACC
TTTTCCAGACTTCATCATATTATACATATGTTCGGCTCTGTGTTGGTTGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_001545566 predicted protein [Botryotinia fuckeliana B05.10]1973e-013
EGV96432 DNA topoisomerase 1 [Cricetulus griseus]1973e-013
EFA79557 hypothetical protein PPL_07608 [Polysphondylium pallidum PN500]1964e-013
XP_001884034 predicted protein [Laccaria bicolor S238N-H82]1947e-013
EFA75100 hypothetical protein PPL_11174 [Polysphondylium pallidum PN500]1947e-013

Swiss-Prot top hits (Blast detail)Scoree value
Q54CD6 Probable ATP-dependent RNA helicase ddx51844e-013
Q54QF4 Mental retardation GTPase activating protein homolog 41811e-012
Q54ST3 DDT domain-containing protein DDB_G02822371773e-012
Q86AH4 Putative uncharacterized protein DDB_G02719821702e-011
Q54FZ4 Putative uncharacterized protein DDB_G02905211674e-011

TrEMBL top hits (Blast detail)Scoree value
A6ST21 Predicted protein1972e-013
D3BGF7 Putative uncharacterized protein1963e-013
B0DJ83 Predicted protein1945e-013
D3BTR4 Putative uncharacterized protein1945e-013
A6SQB8 Predicted protein1928e-013

Arabidopsis top hits (Blast detail)Scoree value
AT1G20130.1 hydrolase, acting on ester bonds / lipase/ structural constituent of cell wall1307e-008
AT1G47300.1 F-box family protein1201e-006
AT4G12480.1 pEARLI 1; lipid binding1191e-006
AT5G16780.1 DOT2 (DEFECTIVELY ORGANIZED TRIBUTARIES 2)1191e-006
AT3G28580.1 AAA-type ATPase family protein1182e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  50%
 
111  50%

Unigene MembersMember information