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Information for unigene UN01984

FASTA Sequence
Unigene ID: UN01984Length: 1595 SSR 
GGCAAAGCTTTTCCATAAAAAAATAACTGTAAAACAGAGTGCATCTCACAACAAAATTTAACCCTTCTCAACGCTGCAAAAACTGT
TTTCAAACGAGATCAAACATCACTAAACATCTGTTTTCACCAACACAACTATCCCCTTCTCTCTGAAATGCAAGCACCATCGGAGT
TTTTAAGTTTTCCGGTTTACTCCCACTTTGATTCTCCTCCTAACCCGATTTCAACTTCCCCAGGAAGCTCAACCACTGCACTCTGC
TCTGCTTATGCTGTTTCTCTCTTCTTGTTACTTGAGTATCTACCACTCTCACCACACCCGTCTCTTGCACACTGCTCCTCTTGTTC
TTCTTCTCAACACCATCTCCAGAATCTTTCGACACATCTTCCCTGGAAAAGACTTCAGCCAAAGAGGTTTCAGCATCATCGATAGC
ATCGATTAACTTCTTAGGACCAGTAGCCTTTTTCTGTTTCTTCTCAGTAGCATCATCGTCCTTGTTACCCAGCCTTCTCTTCTGCC
TATCTTCTTCTTGAATTTGATCTATATCTGGATTGATCTTAGACTTCTTCTTCTTCTTGCTCTTGCTACCTTCATTATCAGCTTCT
TCTTCTTCTTCCTCCGACTTGCTTCTCTTAGAGCTCTTCTTGCTCTTTCGATCCACTTTGGATTCTTCCTCTTCTTCTTCTTCTGC
TGCTGCTGATTTGCTGTGACGACTATCAAAAGTCACATCTTCGGTATCAAATCTAACATGCTTTGCATTCTTGGAGCTTTTATCCA
AGGGTTTAGCGTTAAAGACATTCACTGAAGGAGGGAGCAACTTCCTCACCTTCTTAGCTGACTTCTCGTTGTCAGAGATTGGGTTT
CCTCGAATATTCAAGTTTCGCAAGCAAGATAGTGTACCCAAAACCTCTAAACCAGAGAGACTAGTGATCATATTGTTTCCCACATC
CAGATTCAGGAGTCTCTTGTTGAGTGCAAGTTCTGCTGGGAGAGCCTTAATCTCATTGTGGGCGAGTCGTAGCTCTTTCAAATCAG
AGCAAGACTTGAGAGAAGCCCCGATAGCTTTTATTCTGCAGTCAGACAAAGAAACTTTTGTGAGTTTTTTAAGCTTTGAAAGAGAG
TCACCGATTTAACTGATAGGGTTCCTAGACAGCACGAGACTGTTCAAGTCTTTCAATAGATCTAGCTTGCAAAGAGAGGAGATTTC
ATTATCGTCCAAAATCAAGGCACACAAATTGACAAGGGAAGAGATCTCATTCATAGACTTGAGCTTATTCTTTCCAGCATTCAACA
CTGTAAGCTTAGTTAATCCTTCAATCCCACTCAAGCTCTGTAATTTATTTTCCACAACTGACAGCCACTTCAAATTCAGACAGGAC
TTGAGTCCCTGGAGATCAGTGAGATTGTTGAAGCGGAGGTCGAGCTTCTCCAAGTTTTTGAACTTGCTCAGACAAGACACGTCGGT
GAGAGCTCTGTGGCCAAGGTTAAGTTCCTTGACGGAATCGAGGTCATGTGTTTTCTTCTCTTTTAGAACTTCTTAAACTGTCAATG
ACTTCTTCGTCGCCATCTTCGTCTTCTTCCTCCGTAACGAAAAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874063 hypothetical protein ARALYDRAFT_489085 [Arabidopsis lyrata subsp. lyrata]16459e-181
NP_568416 leucine-rich repeat-containing protein [Arabidopsis thaliana]16153e-177
NP_001190363 leucine-rich repeat-containing protein [Arabidopsis thaliana]9997e-106
XP_002273076 PREDICTED: hypothetical protein [Vitis vinifera]9055e-095
CBI28283 unnamed protein product [Vitis vinifera]8984e-094

Swiss-Prot top hits (Blast detail)Scoree value
P45969 Uncharacterized protein T09A5.92394e-019
Q3T0W4 Protein phosphatase 1 regulatory subunit 72181e-016
P22194 Protein phosphatase 1 regulatory subunit SDS222117e-016
Q9D5S7 Leucine-rich repeat and guanylate kinase domain-containing protein2053e-015
P25146 Internalin-A1992e-014

TrEMBL top hits (Blast detail)Scoree value
Q9FMS0 AT5g22320/MWD9_1116152e-177
B9MYT9 Predicted protein8912e-093
C6TGI7 Putative uncharacterized protein8893e-093
B7FM51 Putative uncharacterized protein8704e-091
B9SCX9 Protein phosphatase 1 regulatory subunit SDS22, putative8552e-089

Arabidopsis top hits (Blast detail)Scoree value
AT5G22320.1 leucine-rich repeat family protein16159e-180
AT4G35470.1 leucine-rich repeat family protein2053e-016
AT2G17440.1 leucine-rich repeat family protein1883e-014
AT3G28770.1 unknown protein1401e-008
AT2G30100.1 ubiquitin family protein1301e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  67%
 
91  33%

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