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Information for unigene UN01994

FASTA Sequence
Unigene ID: UN01994Length: 631 SSR 
AGATTGAAAAACATATAATACCTCCATGGAATTTTTTAACAGTCATGAGTAAAAAAGAACATCATTGTTATGTACATACAAAGCAG
CGAGAAATGAAATGCAGAGAAAGACACAAATCGAAGAGCTAGAACATGAGACAGTACAAGGCAACAAGAAGTGAACCAAGATTCTT
AGTTTCTGGATGTTTTGTTCTTTTATCAGCGAGAAGAACCATAAGATCTTGAGTAGACATTGTTCTCACCAGACCCAGATGATCCA
GATGCCGAAGAAGAAGACGAAGAAGAAGAAGAAGAGAAGAAACCACTGAACGGCCATGGAATCGAGAACCTTCTCCCATTCCCACT
CCTCGCATCATCCTCTCTTCCTCTCTCCCCCACATTCTCAACAACCTCTCTGTCACTACTCTCAGGAACACTTCTCGTCCTCGCTC
CTCCTCCCCCTGACTCAACCTTACTCTCACCATCACCATCATCATTACCAGAAGGAAGCTCGAACCGACACACGGGACACGAGTTA
TGAAGCTCGAGCCAGGGGACAATACACTTGACATGAAACTTATGCTTACACGGCATCTCTTTCGCTTCATCAACGCCTCTCTCAAA
ATCATCCAAACAAACCGAACACTGCAACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864451 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]5359e-053
NP_200445 RING/U-box domain-containing protein [Arabidopsis thaliana]5026e-049
XP_002867566 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]3386e-030
CAA18230 putative protein [Arabidopsis thaliana]3332e-029
NP_194370 RING/U-box domain-containing protein [Arabidopsis thaliana]3332e-029

Swiss-Prot top hits (Blast detail)Scoree value
Q7ZW78 E3 ubiquitin-protein ligase RNF1811743e-012
Q9P0P0 E3 ubiquitin-protein ligase RNF1811691e-011
Q6GPV5 E3 ubiquitin-protein ligase RNF1811663e-011
Q3T0W3 E3 ubiquitin-protein ligase RNF1811654e-011
Q0II22 RING finger protein 1261645e-011

TrEMBL top hits (Blast detail)Scoree value
Q9FM98 Genomic DNA, chromosome 5, P1 clone: MCD75024e-049
O65594 Putative uncharacterized protein AT4g264003332e-029
Q8L5Z3 AT4G26400 protein3332e-029
C5WXH6 Putative uncharacterized protein Sb01g0188002623e-021
A2Z8Q8 Putative uncharacterized protein2614e-021

Arabidopsis top hits (Blast detail)Scoree value
AT5G56340.1 zinc finger (C3HC4-type RING finger) family protein5113e-052
AT4G26400.2 zinc finger (C3HC4-type RING finger) family protein3349e-032
AT4G26400.1 zinc finger (C3HC4-type RING finger) family protein3349e-032
AT1G55530.1 zinc finger (C3HC4-type RING finger) family protein3008e-028
AT3G13430.1 zinc finger (C3HC4-type RING finger) family protein2442e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
61  50%

Unigene MembersMember information