Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN02004

FASTA Sequence
Unigene ID: UN02004Length: 651 SSR 
AGTCGAATTCTATTAAAGATTCCATGTTCAATTTTACTCCTTTTGACTTTTCCCCTTTCTCAACCCTCATAATCCTTGATTACAAG
AAGTGCACGAAACGGCAGAGAAAACATAATCACAAATTCACCCAAATCAATTATTTCCCGCCCATATCTAACCTTCCTTATTTGCC
CATTCACCCTTCTATTTTCCCATTATTCCCACTGTGCCCTCTCCTTTTCCCATCTTTTCCTCCGAACCCACATAGAAAAAAACAGA
GCATTTTAATCCGATCGAAAAACCTCTTCCGGCGTTTAAGGCTTCAAGTCCAGTGATCAACGGCGGTTGCTCATCGGAGAAGAAAC
CGCTTCTTCATCCTCCTCCTCGTAGCCTTCAAGCATCGACTGAAATTCTCTCCCGTATCTTCTTGGACTCTGCTCATCTGTAGAAG
ATGTAGGACATAAAGAGACCAGACCACCCACTGGATCTGAACTTCTTAATCTCTTCATCATCAGACAAACACTTAATATAAGGTTC
TCTCGAAAGTCTTTGTTTACTTCAAGATTACTACTTGATGATCTTTGTCTCTATGTTAACAAGAGAGAAATGCACATAAATCAGGA
CAGTGGAGGGATTCTCTTTAGAGAGAGAGAGAGTTCCTTTTTCATATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAF73482 hb-6-like protein [Brassica rapa subsp. pekinensis]2275e-017
AAR04932 homeodomain-leucine zipper protein [Brassica napus]2267e-017
NP_565536 homeobox-leucine zipper protein ATHB-6 [Arabidopsis thaliana]2123e-015
AAD41726 homeobox protein ATHB6 [Arabidopsis thaliana]2123e-015
XP_002880443 hypothetical protein ARALYDRAFT_481105 [Arabidopsis lyrata subsp. lyrata]2071e-014

Swiss-Prot top hits (Blast detail)Scoree value
P46668 Homeobox-leucine zipper protein ATHB-62121e-016

TrEMBL top hits (Blast detail)Scoree value
Q9M4Q1 Hb-6-like protein2274e-017
Q69G85 Homeodomain-leucine zipper protein2265e-017
B7ZWQ6 Putative uncharacterized protein (Fragment)1396e-007

Arabidopsis top hits (Blast detail)Scoree value
AT2G22430.1 ATHB6; DNA binding / protein binding / sequence-specific DNA binding / transcription activator/ transcription factor2121e-017
AT4G40060.1 ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16); sequence-specific DNA binding / transcription activator/ transcription factor1134e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  33%
 
72  67%

Unigene MembersMember information