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Information for unigene UN02081

FASTA Sequence
Unigene ID: UN02081Length: 722 SSR 
GGGACCTTGATCATGAGAGTTAGTTTCAGTCTCCGTTAAATCTTCTGAAAGCGTTTGATTACATCTCGATTTTATAGTTTTGATCT
CGGATTTCGGAATGGTTGGGGAAGGAGGAGAATCGAACGAGCCACAGACCGTCGTCGACGTCGACGGAGGAGGAGGAGGAGAGGTG
GTTGCTGTGAACGTCAGGTGCTCCAACGGCTCGAAATTTAGCGTGAGGACGAGCCTCGAATCAACCGTAGAGTCTTTCAAAGCTTT
ACTAGCTCAGAACTGCGACGTCCCAGCTAACCAACAACGCTTGATTTACAAGGGACGCATCCTCAAAGACGACGATCACACCCTCC
TTAGCTATGGTGTACAGGCTGGTCACGCTCTTGATATGGCTCGAGTCTCTGCACCTTCTACAAATGCTAGGAGCCAAACTACTTCA
CCTAGTGTTGTTACTCGAGGGGTTCAACAACTAGCTCAAAACCCAAACATTGTTATGATGAACGCACCGAGCATTCAGAACAACCC
TGAACTTCTGAGGACGTTGATAAGGAGCAACCCTCGGATGCGTGAGCTTGTGGATCGTAACCCTGAGCTTGGACATATACTCAACG
ACCCGAGCTTCCTTCGGCAGAGTCTGCAAGCTGCGAGGAACCCTGAGCTTATGCGTGAGATGACGCGGAATGCTGATAGGGCGTTG
AGTAACATTGAGCTACTCCTGAGGGTTTAACATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002886103 ubiquitin family protein [Arabidopsis lyrata subsp. lyrata]3291e-028
NP_179311 ubiquitin-like protein [Arabidopsis thaliana]3262e-028
AAK59681 putative ubiquitin protein [Arabidopsis thaliana]3262e-028
NP_565407 ubiquilin [Arabidopsis thaliana]3262e-028
XP_002886102 ubiquitin family protein [Arabidopsis lyrata subsp. lyrata]3262e-028

Swiss-Prot top hits (Blast detail)Scoree value
Q9UMX0 Ubiquilin-12311e-018
Q8R317 Ubiquilin-12311e-018
Q5R684 Ubiquilin-12311e-018
Q9NIF3 Ubiquilin2301e-018
Q9NRR5 Ubiquilin-42264e-018

TrEMBL top hits (Blast detail)Scoree value
Q94C51 Putative ubiquitin protein3261e-028
Q9SII8 Putative ubiquitin protein3261e-028
Q9SII9 Putative ubiquitin protein3261e-028
A9SEM5 Predicted protein3144e-027
A9SZR4 Predicted protein3082e-026

Arabidopsis top hits (Blast detail)Scoree value
AT2G17200.1 ubiquitin family protein3384e-032
AT2G17190.1 ubiquitin family protein3269e-031
AT5G42220.1 ubiquitin family protein1314e-008
AT5G25270.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein modification process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT5G42220.1); Has 1533 Blast hits to 627 proteins in 167 species: Archae - 0; Bacteria - 307; Metazoa - 363; Fungi - 153; Plants - 33; Viruses - 41; Other Eukaryotes - 636 (source: NCBI BLink).1118e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  50%
 
61  50%

Unigene MembersMember information