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Information for unigene UN02088
| FASTA Sequence |
| Unigene ID: UN02088 | Length: 1248 |
SSR | | CAGCAATTAGCAGAACGAATCTGATCTTCCGAGGAGCTTGCGTGAATAATCACAAGCATCATCATGTAGATGATTACTCTGTTGTG
TCATCGCCGGTGAGTTTTGGTCTGAGGAAGAGCTTCTCCTCCTCCTCTCTCAAGCTGAAGAATCCTCATACTCTGTTCCAGACCAC
CTTCACAGGGAGCTTCAGATCATCATCATCATCATCCATCTCAGCTCAGACAACGCTGAGGATTGGGACACCTCAGAAATGGTGGG
AGAAGGGATTGAAAGAGAACATGAGAGAGATCTCTTCAGCTCAGGACCTTGTTGACTCTCTCACCAACGCTGGTGATAAGCTCGTT
GTGGTTGATTTTTTCTCTCCTGCCTGTGGTGGCTGCAAGGCTCTTCATCCTAAGATATGTCAGTTGGCAGATCAGAACCCTGATGT
GCAGTTTCTTCAGGTGAACTACGAGGAGCACAAGTCCATGTGTTACAGTCTTGGTGTCCATGTCCTCCCGTTCTTTAGATTCTACC
GTGGCGCTCATGGTCGTGTCTGCAGCTTTAGCTGCACCAATGCTACGATCAAGAAGTTCAGAGATGCGTTGGCGAAGCATAGTCCA
GATAGGTGCAGCCTCGGACCGACCAAAGGGCTTGAAGAGAAAGAGCTTGTCGCACTTGCAGCCAACAAGGAACTCGACTTTAGTTA
CACGCCCAAGGCTGTACCTGTTGAGGAAGAAGCACCCGTGCCCGCTTCCAACCCTGTTCCTCATCCATCGATGAGCGCCAATGATG
AAAAGACATTGGTTTCCGCAGGGAGATGATTACCGTTTTGAGAGCCAGTAAATAATTATCTGTACAGTTGTTTGCGTGACATTAGT
ACTAGCAACTGGATATACATATGTTGCAGTATCTAAAGTTGTAAGTTCTCGGAGCAGCCGGTTTGATGGGGGTTTAGTTTTTTTTC
GGGTTCCCCTGAGCAAAAACCGGTTTCATGTGGTTTTCCTAGAGCAAGACCAGTTTTTATGGTTTCTCGAGTTTTGCTCAGTTCTT
ATGGGATTGAAGAGTGGATGGTCGTGCGACTGTGTGCAACCATGGAAGCTTTCTTCTTCAGTCTGCTTCAGTAGGATGTTTTTCTC
TCTTTGGCTTGTTTTTTTTTTTACTGTTTAAAGGTATTTTCTATGTAAGTAAAAGTATCCAGTAAATTTTATGTAAAAGTCGCTCT
ATGGATTTGATATTTTGTATAAGAATGTAAAGGTTGTTTGTGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34000 unnamed protein product [Thellungiella halophila] | 1044 | 3e-111 |
| NP_172333 thioredoxin-like 1-1 [Arabidopsis thaliana] | 1015 | 7e-108 |
| XP_002889703 thioredoxin family protein [Arabidopsis lyrata subsp. lyrata] | 1005 | 1e-106 |
| NP_001077491 thioredoxin-like 1-1 [Arabidopsis thaliana] | 943 | 2e-099 |
| NP_001117248 thioredoxin-like 1-1 [Arabidopsis thaliana] | 821 | 2e-085 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O64654 Thioredoxin-like 1-1, chloroplastic | 1015 | 3e-109 |
| Q10M18 Thioredoxin-like 1-2, chloroplastic | 720 | 5e-075 |
| Q6Z4N3 Thioredoxin-like 1-1, chloroplastic | 694 | 5e-072 |
| O22779 Thioredoxin-like 1-3, chloroplastic | 661 | 3e-068 |
| Q9XFI1 Thioredoxin-like 1-2, chloroplastic | 562 | 1e-056 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8MQQ7 Uncharacterized protein At1g08570.2 | 943 | 1e-099 |
| A9PI73 Predicted protein | 779 | 1e-080 |
| B9IPM3 Predicted protein | 776 | 2e-080 |
| A2Q5R3 Thioredoxin domain 2; Thioredoxin fold | 770 | 1e-079 |
| B9SHJ2 Thioredoxin, putative | 762 | 1e-078 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G08570.1 ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 1016 | 2e-110 |
| AT1G08570.2 ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 944 | 4e-102 |
| AT1G08570.3 ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 822 | 6e-088 |
| AT1G08570.4 ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 822 | 6e-088 |
| AT2G33270.1 ACHT3 (ATYPICAL CYS HIS RICH THIOREDOXIN 3) | 661 | 3e-069 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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