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Information for unigene UN02108
| FASTA Sequence |
| Unigene ID: UN02108 | Length: 1199 |
SSR | | GGGCCGTTGTTGGAACGCTCTCTGTTTCGTTCACCAAAGGTTTTTCTTGGATGTGGTGAAGCTTTTCTCTTTAGGGTTCGCCGGCT
GAGTGGGGGGAGAATTCCGATTTGATCTTCGTAATATCTCCTGGCGACATGGCATCGAATCTCCCGATGAGCCCTGAACTGGAACA
GATCCATGGAGGAATCCGTGACCATTTCCGAGCCCTCGCGAATGGGTTCCAGAGGTTGGATAAGATCAAGGATTCTACTAGACAGA
GCAAGCAACTTGAGGAACTTACTGACAAGATGAGAGACTGTAAAAGGTTGGTTAAGGACTTTGACCGTGAACTCAAGGACGAGGAA
GCTAGAAATCCTCCTGAAGTAAATAAGCAATTGAACGATGAGAAACAATCTATGATTAAGGAACTCAACTCTTATGTTGCACTAAG
AAAAACGTATATGAGTACCCTTGGCAACAAGAAAGTTGAGCTTTTTGATATGGGAGCTGGAGCCAGCGGCGAACCACCTACAGCTG
AAGAAAATGTTCAAGTAGCTTCAGCAATGTCAAACCAGGAGCTTGTTGATGCTGGAATGAACAGAATGGATGAGACTGACCAGGCC
ATTGAGCGCTCAAAACAGGTTGTAGAGCAAACAATAGAAGTTGGAACTCAAACTGCAGCTAACTTAAAGGGACAGACGGATCAAAT
GGGGCGTGTGGTTAACCAATTGGACACCATTCAGTTCTCTCTCAAGAAGGCTTCCAAGCTAGTCAAAGAGATAGGCAGACAGGTGG
CAACTGATAAATGCACAATGATGTTTCTGTTTCTCATTGTATGTGGTGTTGTAGCCATTATCGTAGTGAAGATCGTACACCCGAAT
AACAAAGACATTAGGGACATCCCAGGGTTAGCTCCTCCAGCGCCATCGAGGAAGCTACTCTACTTGAGAAATCCAGAGTACATGCG
AAGAAAGAAAGCTCTGTCTGTATATTTATTTACGTGGACTGAGGATATTTGCATCTTGAGGTTCGGTAATTTGATCTTCTTTGCTT
AATTCATTTGTTTACACTCCATGAGAGAGAGAGAGGAGAGATTGTGTGGTTTGATAGTTCATTTGAATCTTTGTTGTTTTTGACTG
GAGAGGGCTTTGTATATTTTCATCTTCTGGTAGTAACTTTTAATCACTTGTTTTGTATAAAATCCAGACCATGTCATACCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566578 Novel plant SNARE 13 [Arabidopsis thaliana] | 1253 | 2e-135 |
| XP_002885211 NPSN13 [Arabidopsis lyrata subsp. lyrata] | 1249 | 5e-135 |
| AAM61208 unknown [Arabidopsis thaliana] | 1227 | 2e-132 |
| NP_175258 Novel plant SNARE 12 [Arabidopsis thaliana] | 1182 | 3e-127 |
| XP_002519319 novel plant snare, putative [Ricinus communis] | 1133 | 1e-121 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LRP1 Novel plant SNARE 13 | 1253 | 7e-137 |
| Q9LNH6 Novel plant SNARE 12 | 1182 | 1e-128 |
| Q944A9 Novel plant SNARE 11 | 845 | 1e-089 |
| O88384 Vesicle transport through interaction with t-SNAREs homolog 1B | 149 | 7e-009 |
| Q2KIU0 Vesicle transport through interaction with t-SNAREs homolog 1B | 145 | 2e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q541Y4 Putative uncharacterized protein At1g48240/F21D18_3 | 1182 | 2e-127 |
| B9S000 Novel plant snare, putative | 1133 | 9e-122 |
| B9HXA1 Predicted protein | 1088 | 2e-116 |
| C6TAL6 Putative uncharacterized protein | 1078 | 2e-115 |
| Q2V2S5 Putative uncharacterized protein At3g17440.2 | 995 | 9e-106 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G17440.1 NPSN13 (NOVEL PLANT SNARE 13) | 1253 | 6e-138 |
| AT1G48240.1 ATNPSN12; protein transporter | 1182 | 1e-129 |
| AT3G17440.2 NPSN13 (NOVEL PLANT SNARE 13) | 995 | 5e-108 |
| AT2G35190.1 NPSN11 (NOVEL PLANT SNARE 11); SNAP receptor/ protein transporter | 847 | 7e-091 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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