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Information for unigene UN02142
| FASTA Sequence |
| Unigene ID: UN02142 | Length: 612 |
SSR | | GATCCACTCTTTCTTTCTTGTTTGTTTCTTTCTCCAGCCCTTCGCCAGACCATCAAGGAGGGAGGACAACAAAAGCTTAGCTTTTT
TTCTGGGGTTTAATCAATCAAAGAAGAACAGATTTGAATTTTTATTGGGTCTTCAGAGAAGAAGAAGCAGAGACATTTAAAAAGGA
GGGAAGACAATGGAGGAAACAATGGCGGCTAGGTATTGGTGTCACATGTGTTCACAGATGGTGAACCCCACAATGGAATCCGAGAT
CAAATGCCCCTTTTGCCAAAGCGGATTCGTCGAAGAAATGAGCGGTAACGGTAACGGAGGCTTAAGAGACGTTCAAGACCCAGAAA
CGGAGTTTGGAGCAACAGACCGTGCCATGTCTCTATGGGCACCGATCTTGCTCGGGATGATGAGCAGTCCTCGGAGACGAAGAAGG
TTCAGAAGAGCAGAGCTCGGTTCAGAAGAAGAAGACAATGAAGACGATGATGATGTTGTTGATCGTCATCATCATCATCATCATCA
TAGAGCTAGGCGTCACGGTGGAGAGATTGATTTGGACAGAGAGTTCGAATCTATCTTGAGGAGAAGACAGAGGAGCTCGGGGAATA
TACTGCAGCT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002864451 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 590 | 4e-059 |
| XP_002862493 hypothetical protein ARALYDRAFT_359584 [Arabidopsis lyrata subsp. lyrata] | 573 | 3e-057 |
| NP_194370 RING/U-box domain-containing protein [Arabidopsis thaliana] | 503 | 4e-049 |
| XP_002867566 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 464 | 1e-044 |
| NP_200445 RING/U-box domain-containing protein [Arabidopsis thaliana] | 451 | 5e-043 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L5Z3 AT4G26400 protein | 503 | 3e-049 |
| Q9FM98 Genomic DNA, chromosome 5, P1 clone: MCD7 | 451 | 3e-043 |
| O65594 Putative uncharacterized protein AT4g26400 | 430 | 9e-041 |
| B9SBM6 Zinc finger protein, putative | 350 | 2e-031 |
| B9GXX2 Predicted protein (Fragment) | 304 | 4e-026 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G26400.2 zinc finger (C3HC4-type RING finger) family protein | 503 | 2e-051 |
| AT4G26400.1 zinc finger (C3HC4-type RING finger) family protein | 503 | 2e-051 |
| AT5G56340.1 zinc finger (C3HC4-type RING finger) family protein | 451 | 2e-045 |
| AT1G55530.1 zinc finger (C3HC4-type RING finger) family protein | 262 | 2e-023 |
| AT3G13430.1 zinc finger (C3HC4-type RING finger) family protein | 142 | 2e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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