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Information for unigene UN02142

FASTA Sequence
Unigene ID: UN02142Length: 612 SSR 
GATCCACTCTTTCTTTCTTGTTTGTTTCTTTCTCCAGCCCTTCGCCAGACCATCAAGGAGGGAGGACAACAAAAGCTTAGCTTTTT
TTCTGGGGTTTAATCAATCAAAGAAGAACAGATTTGAATTTTTATTGGGTCTTCAGAGAAGAAGAAGCAGAGACATTTAAAAAGGA
GGGAAGACAATGGAGGAAACAATGGCGGCTAGGTATTGGTGTCACATGTGTTCACAGATGGTGAACCCCACAATGGAATCCGAGAT
CAAATGCCCCTTTTGCCAAAGCGGATTCGTCGAAGAAATGAGCGGTAACGGTAACGGAGGCTTAAGAGACGTTCAAGACCCAGAAA
CGGAGTTTGGAGCAACAGACCGTGCCATGTCTCTATGGGCACCGATCTTGCTCGGGATGATGAGCAGTCCTCGGAGACGAAGAAGG
TTCAGAAGAGCAGAGCTCGGTTCAGAAGAAGAAGACAATGAAGACGATGATGATGTTGTTGATCGTCATCATCATCATCATCATCA
TAGAGCTAGGCGTCACGGTGGAGAGATTGATTTGGACAGAGAGTTCGAATCTATCTTGAGGAGAAGACAGAGGAGCTCGGGGAATA
TACTGCAGCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864451 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]5904e-059
XP_002862493 hypothetical protein ARALYDRAFT_359584 [Arabidopsis lyrata subsp. lyrata]5733e-057
NP_194370 RING/U-box domain-containing protein [Arabidopsis thaliana]5034e-049
XP_002867566 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]4641e-044
NP_200445 RING/U-box domain-containing protein [Arabidopsis thaliana]4515e-043

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8L5Z3 AT4G26400 protein5033e-049
Q9FM98 Genomic DNA, chromosome 5, P1 clone: MCD74513e-043
O65594 Putative uncharacterized protein AT4g264004309e-041
B9SBM6 Zinc finger protein, putative3502e-031
B9GXX2 Predicted protein (Fragment)3044e-026

Arabidopsis top hits (Blast detail)Scoree value
AT4G26400.2 zinc finger (C3HC4-type RING finger) family protein5032e-051
AT4G26400.1 zinc finger (C3HC4-type RING finger) family protein5032e-051
AT5G56340.1 zinc finger (C3HC4-type RING finger) family protein4512e-045
AT1G55530.1 zinc finger (C3HC4-type RING finger) family protein2622e-023
AT3G13430.1 zinc finger (C3HC4-type RING finger) family protein1422e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  50%
 
71  50%

Unigene MembersMember information