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Information for unigene UN02196

FASTA Sequence
Unigene ID: UN02196Length: 1338 SSR 
ATCAAGTTCAACTTTCATTAAGCCTCGAATGAATAGATTTACGTCGCAAAACGAACATGATATAAAATGTACCAATTTACCAACTT
TCAGTTAAGAGAGACCAACCCCATTTTGGAAAAAAAAAAAGTGAAACCACATGATTAACAAGATCAGCTAAATTTACCAATTTCCA
TCTTCTTCTTGATTGCTTTTTGACCATGATATATAAACGCATCTATTATCCCAGACACCGTGAAAACACCTCCGACTATGGCACAA
ACATTCGTCAAGAAGTGCAAGAACGATATATGTTGGTACAACCTTGATAAAATATTGGTACATAGCATTGGGTGTGTCTTGACTCC
ACTGGACTTTGTCAAGAGGGTTCACGACACCAGGAAAGTAGTCCCCAAAAGTCAGTCGATTGATCTTGTGACTTATGTTAAAACTG
TCTTTCTGAAAAGCAAGAAGATCATGGACGTGAACGCCCGCCTGATGGAAGCTTTTCCCGGGAGCAAAGTGGAAGTTTCCCGCCAC
TTTATTCACCTCCAAGAACCCATAGATATTACACCCTTCACCTTCTTCATCCTTTACTCTTTGTAAGAAACCTTCTCGTTTACACT
GATCAATCAAATCTGGATTGTAACACCCCACCCTTTTTTTCTATATGCTTCACGAACATCCTCACATGAATTGCAGCAGTCATGCT
CTTCGGCTTCAGCACCATAACAAGAACCACAGTAAGTCTCATTATGTTCCAGCCGACCACCATGTTTCTGCAGTGGCTTCTCAATC
TTAGTAGCGCCTATGCTGTCCTGTCTTGCTTCTATAGTGTTCCCATGAGAATCTAGTCTTCTCTTAACGATATCATGTTTCACGTC
AAGATGGAGCTCTCCACTAATATCCATAGCATCAACACTTAGAATGGAACACGCTAGAGCAGGAAAAGTCATATCAAAATTGATGC
GTAACGTCTCTCCTCTAGAAGTATCCACAACGAGCTTCGTCTCGGTAACGCTATGAAGATATAATCTTAGCTCGGAGAAGAAGAGA
AGGAACATGACAACGGAGGAGACGAGGGTGATAACGCCGCCGGATAACGTACGGCTGTAAAAGTCCTCGTTGATCTTTGGATATGC
ATCCAGATTCCTCAATTTATTCAGGATCCCCGCCATCTCCCGGGGGGACGAGATTCGCTTTTTCCACGGATTCGAATCGAAAAGAG
GATTATGCCCGGAGATCAATCAGGTGAGCGAAACGTCGTCGGAAGCGAAATTCTTCCGAGGATGCGTTCGAGAGAGAGAGATTTTC
TTTTCTTTGGTTGCGTCACCGTCGGACGGAAAAGCGTTTACGGTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891208 hypothetical protein ARALYDRAFT_891247 [Arabidopsis lyrata subsp. lyrata]9091e-095
NP_001154394 Endoplasmic reticulum vesicle transporter protein [Arabidopsis thaliana]8974e-094
NP_564467 Endoplasmic reticulum vesicle transporter protein [Arabidopsis thaliana]8974e-094
XP_002306582 predicted protein [Populus trichocarpa]8437e-088
XP_002513896 Endoplasmic reticulum-Golgi intermediate compartment protein, putative [Ricinus communis]8222e-085

Swiss-Prot top hits (Blast detail)Scoree value
Q66KH2 Endoplasmic reticulum-Golgi intermediate compartment protein 34258e-041
Q803I2 Endoplasmic reticulum-Golgi intermediate compartment protein 34241e-040
Q9CQE7 Endoplasmic reticulum-Golgi intermediate compartment protein 34203e-040
Q6NVS2 Endoplasmic reticulum-Golgi intermediate compartment protein 34169e-040
Q9Y282 Endoplasmic reticulum-Golgi intermediate compartment protein 34142e-039

TrEMBL top hits (Blast detail)Scoree value
Q9C8W1 At1g360508973e-094
B9H750 Predicted protein8435e-088
B9RJH7 Endoplasmic reticulum-Golgi intermediate compartment protein, putative8221e-085
Q2V4M1 Putative uncharacterized protein At1g22200.27763e-080
Q9LM16 F16L1.7 protein7763e-080

Arabidopsis top hits (Blast detail)Scoree value
AT1G36050.1 unknown protein8971e-096
AT1G36050.2 unknown protein8971e-096
AT1G22200.1 unknown protein7761e-082
AT1G22200.2 unknown protein7761e-082
AT3G22290.1 unknown protein2681e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  33%
 
61  33%
 
91  33%

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